RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TMEM252Q8N6L7 170 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 PLEKHF2Q9H8W4 249 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 TRAPPC2LQ9UL33 140 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 STRAPQ9Y3F4 350 aaKnown RBP4.55□□□□□ -1.68
VAPA-203ENST00000577539 SPTBN2O15020 2390 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 FRYLO94915 3013 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 A0A1W2PRV1 198 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 ARGFXA6NJG6 315 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 KLK10O43240 276 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 RHBDL1O75783 438 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 GRPP07492 148 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 IAPPP10997 89 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 GNG3P63215 75 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 ARG2P78540 354 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 SLC10A1Q14973 349 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 RBPMS2Q6ZRY4 209 aaKnown RBP4.55□□□□□ -1.68
VAPA-203ENST00000577539 ZNF573Q86YE8 665 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 GCNT2Q8N0V5 402 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 FAM24BQ8N5W8 94 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 NTNG2Q96CW9 530 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 BOD1Q96IK1 185 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 RARRES2Q99969 163 aa4.55□□□□□ -1.68
VAPA-203ENST00000577539 FGF23Q9GZV9 251 aaPredicted RBP4.55□□□□□ -1.68
VAPA-203ENST00000577539 PRRC2CQ9Y520 2896 aaKnown RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 ZNF98A6NK75 572 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 ZNF724A8MTY0 619 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 TNFSF15O95150 251 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 IFNA5P01569 189 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 S100A9P06702 114 aaKnown RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 CTXN2P0C2S0 81 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 VDAC1P21796 283 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 ACP1P24666 158 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 ARL3P36405 182 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 UBE2NP61088 152 aaKnown RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 TMEM267Q0VDI3 215 aaPredicted RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 HMGN3Q15651 99 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 C10orf91Q5T1B1 145 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 STX12Q86Y82 276 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 LINC00469Q8N7U9 141 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 LRTM2Q8N967 370 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 OR5A2Q8NGI9 324 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 SPSB4Q96A44 273 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 TMEM45BQ96B21 275 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 GINS3Q9BRX5 216 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 CHODLQ9H9P2 273 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 CDH20Q9HBT6 801 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 SEPSECSQ9HD40 501 aaKnown RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 SLC35D1Q9NTN3 355 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 TRAV34A0A0B4J273 112 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 LNP1A1A4G5 178 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 KLRC4-KLRK1H3BQV0 150 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 NXPH2O95156 264 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 PSG2P11465 335 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 SELEP16581 610 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 RAB5CP51148 216 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 RPL23AP62750 156 aaKnown RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 HERPUD1Q15011 391 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 MPV17LQ2QL34 196 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 OR2B11Q5JQS5 317 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 MDP1Q86V88 176 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 MYPOPQ86VE0 399 aaPredicted RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 Q8NA96 180 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 OR4D5Q8NGN0 318 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 SLC35B3Q9H1N7 401 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 OR1A1Q9P1Q5 309 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 RNF150Q9ULK6 438 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 LIPGQ9Y5X9 500 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 URGCP-MRPS24S4R325 110 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 A0A0G2JNJ9 132 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A7PA6NKC0 464 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A22PA8MWA6 464 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A12PA8MX19 464 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A23PA8MXZ1 464 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 PGLYRP1O75594 196 aaPredicted RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 EIF3GO75821 320 aaKnown RBP eCLIP4.54□□□□□ -1.68
VAPA-203ENST00000577539 MT-CO3P00414 261 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 TDGF1P13385 188 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 RAB2AP61019 212 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 CCL20P78556 96 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 HABP2Q14520 560 aaPredicted RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 COLCA1Q6ZS62 124 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 CNEP1R1Q8N9A8 125 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 POM121L2Q96KW2 1035 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 GUCD1Q96NT3 240 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 GCM1Q9NP62 436 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 CACNG5Q9UF02 275 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 Q9UFV3 132 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 KLF13Q9Y2Y9 288 aaPredicted RBP4.54□□□□□ -1.68
VAPA-203ENST00000577539 PCNX2A6NKB5 2137 aa4.54□□□□□ -1.68
VAPA-203ENST00000577539 IGKV3D-15A0A087WSY6 115 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 IGKV1-6A0A0C4DH72 117 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 COLCA2A8K830 154 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 CDIPTO14735 213 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 LYZL6O75951 148 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 NAPSAO96009 420 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 SP1P08047 785 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 FBP1P09467 338 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 F2RP25116 425 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms