RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NDUFA3O95167 84 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 ALPLP05186 524 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 ARSBP15848 533 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 RCC1P18754 421 aaPredicted RBP8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 ADARB1P78563 741 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 RAB40BQ12829 278 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 RIPK1Q13546 671 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 PLGLAQ15195 96 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 CCDC58Q4VC31 144 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 C1orf146Q5VVC0 180 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 ZNF554Q86TJ5 538 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 GAPTQ8N292 157 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 CASTOR1Q8WTX7 329 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 Q96MT0 163 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 ZNF184Q99676 751 aaPredicted RBP8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 SLA2Q9H6Q3 261 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 TAF9BQ9HBM6 251 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 CKLFQ9UBR5 152 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 FBXO7Q9Y3I1 522 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 GMPPBQ9Y5P6 360 aa8.95□□□□□ -0.98
CTDNEP1-212ENST00000576613 IGHV3-11P01762 117 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 GTF2A1P52655 376 aaPredicted RBP8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 TPPP2P59282 170 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 CX3CL1P78423 397 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 HTD2P86397 168 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 NDPQ00604 133 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 GNMTQ14749 295 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 LRRC36Q1X8D7 754 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 ACTBL2Q562R1 376 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 RPL22L1Q6P5R6 122 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 CD200R1LQ6Q8B3 271 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 ZNF833PQ6ZTB9 187 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 HAPLN4Q86UW8 402 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 ODF3L1Q8IXM7 274 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 OR2AK2Q8NG84 335 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
CTDNEP1-212ENST00000576613 SAA2-SAA4A0A096LPE2 208 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 H0Y980 276 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 RRHO14718 337 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 SC5DO75845 299 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 MAS1P04201 325 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 TFAP2AP05549 437 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 GLAP06280 429 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 SAA2P0DJI9 122 aaPredicted RBP8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 ZP3P21754 424 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 PPP1CCP36873 323 aaKnown RBP8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 HAGHQ16775 308 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 ZIK1Q3SY52 487 aaPredicted RBP8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 AKIRIN2Q53H80 203 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 LY6G6FQ5SQ64 297 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 FAM71F2Q6NXP2 309 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 UNQ5815/PRO19632Q6UWF5 114 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 FAM131AQ6UXB0 335 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 GTSCR1Q86UQ5 136 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 PPP1R27Q86WC6 154 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 OR52L2PQ8NGH6 319 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 OR52I1Q8NGK6 324 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 MS4A10Q96PG2 267 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 FBXL15Q9H469 300 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 TUBA4BQ9H853 241 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 AMBNQ9NP70 447 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 AASSQ9UDR5 926 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 NUBP2Q9Y5Y2 271 aa8.93□□□□□ -0.98
CTDNEP1-212ENST00000576613 OR5H14A6NHG9 310 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 FAM90A7PA6NKC0 464 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 FAM90A23PA8MXZ1 464 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 EI24O14681 340 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 YPEL1O60688 119 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 TRGV3P03979 118 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 FUT3P21217 361 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 MC5RP33032 325 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 OR3A3P47888 321 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 GALMQ96C23 342 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 RHOVQ96L33 236 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 YPEL2Q96QA6 119 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 SELENOIQ9C0D9 397 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 RANGRFQ9HD47 186 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 CNOT2Q9NZN8 540 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 PIPOXQ9P0Z9 390 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 STEAP1Q9UHE8 339 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 RPL36Q9Y3U8 105 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 LRRC42Q9Y546 428 aa8.92□□□□□ -0.98
CTDNEP1-212ENST00000576613 UBE2QL1A1L167 161 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 H7C2Y5 167 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 RBBP9O75884 186 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 GSTP1P09211 210 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 LIMS3P0CW19 117 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 LIMS4P0CW20 117 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 EGR2P11161 476 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 MGMTP16455 207 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 IGFBP3P17936 291 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 GABRB1P18505 474 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 RASSF2P50749 326 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 ALDH3A2P51648 485 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 MOGAT2Q3SYC2 334 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 AWAT2Q6E213 333 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 XAF1Q6GPH4 301 aa8.91□□□□□ -0.98
CTDNEP1-212ENST00000576613 LCN12Q6JVE5 192 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms