RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 OR1A1Q9P1Q5 309 aa11.34□□□□□ -0.59
RPAIN-217ENST00000575711 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
RPAIN-217ENST00000575711 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
RPAIN-217ENST00000575711 TRBV6-7A0A0A0MS04 114 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 FABP12A6NFH5 140 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 SLC31A2O15432 143 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 TCF21O43680 179 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 FCER2P06734 321 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 IL3RAP26951 378 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.6
RPAIN-217ENST00000575711 SSX2Q16385 188 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 LDLRAD2Q5SZI1 272 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 Q6YL49 198 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 RPEQ96AT9 228 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 AJUBAQ96IF1 538 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 JMJD8Q96S16 334 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 ABHD1Q96SE0 405 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 NAV3Q8IVL0 2385 aa11.33□□□□□ -0.6
RPAIN-217ENST00000575711 A0A0A6YYJ9 748 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 RAB7AP51149 207 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 ZNF134P52741 427 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 HILS1P60008 231 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 BAMBIQ13145 260 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 RNASE12Q5GAN4 147 aaKnown RBP11.32□□□□□ -0.6
RPAIN-217ENST00000575711 TPTE2P1Q5T6R2 138 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 FAM131AQ6UXB0 335 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 LDLRAD3Q86YD5 345 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 SNAPC3Q92966 411 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 RDH8Q9NYR8 311 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 ANAPC10Q9UM13 185 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
RPAIN-217ENST00000575711 OOSP1A8MZH6 123 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 LY6LH3BQJ8 138 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 CTDSPLO15194 276 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 ST8SIA5O15466 376 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 NAT1P18440 290 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 PAX6P26367 422 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 RCVRNP35243 200 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 OR5AP2Q8NGF4 316 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 OR6Q1Q8NGQ2 317 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 FCAMRQ8WWV6 532 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 TOLLIPQ9H0E2 274 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 DPAGT1Q9H3H5 408 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
RPAIN-217ENST00000575711 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 GABARAPH6UMI1 98 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 HSD17B6O14756 317 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-217ENST00000575711 RBBP9O75884 186 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 OR3A3P47888 321 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 ZNF137PP52743 207 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 TAS2R46P59540 309 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 ACTBP60709 375 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 ACTG1P63261 375 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 AANATQ16613 207 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 PLA1AQ53H76 456 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 SPANXN2Q5MJ10 180 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-217ENST00000575711 DYNAPQ8N1N2 210 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 TMEM86BQ8N661 226 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 SSX3Q99909 188 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 SOSTQ9BQB4 213 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 PARP12Q9H0J9 701 aaKnown RBP11.3□□□□□ -0.6
RPAIN-217ENST00000575711 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-217ENST00000575711 GHITMQ9H3K2 345 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 ABCB10Q9NRK6 738 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 PIPOXQ9P0Z9 390 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 POMT1Q9Y6A1 747 aa11.3□□□□□ -0.6
RPAIN-217ENST00000575711 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 RAB29O14966 203 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
RPAIN-217ENST00000575711 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-217ENST00000575711 HLA-DMAP28067 261 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 IER3P46695 156 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 DGCR2P98153 550 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 CDK10Q15131 360 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 CCDC190Q86UF4 302 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 OR8H3Q8N146 312 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 OR5H2Q8NGV7 314 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 OR5R1Q8NH85 324 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 SMIM4Q8WVI0 70 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 KLK11Q9UBX7 282 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 MTFP1Q9UDX5 166 aa11.29□□□□□ -0.6
RPAIN-217ENST00000575711 RBM7Q9Y580 266 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms