RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SOX2P48431 317 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 TMEM267Q0VDI3 215 aaPredicted RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MRPL28Q13084 256 aaKnown RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 KLF5Q13887 457 aaPredicted RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 DNAL1Q4LDG9 190 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 ACTBL2Q562R1 376 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 LY6G6FQ5SQ64 297 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MEDAGQ5VYS4 303 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 TRAT1Q6PIZ9 186 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 AMIGO2Q86SJ2 522 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 SLC7A6OSQ96CW6 309 aaPredicted RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MRPL48Q96GC5 212 aaKnown RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MS4A10Q96PG2 267 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MYCBPQ99417 103 aaPredicted RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 ABHD14AQ9BUJ0 271 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 RSRP1Q9BUV0 290 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 ALG8Q9BVK2 526 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 SLA2Q9H6Q3 261 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 TUBA4BQ9H853 241 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 TAF9BQ9HBM6 251 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 SPACA1Q9HBV2 294 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 TMEM138Q9NPI0 162 aa7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MBNL3Q9NUK0 354 aaKnown RBP7.6□□□□□ -1.19
CALCOCO2-227ENST00000575560 MCRIP1C9JLW8 97 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 YPEL1O60688 119 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 CA11O75493 328 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 SC5DO75845 299 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 FADS2O95864 444 aaKnown RBP7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 OR3A3P47888 321 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 TPPP2P59282 170 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 HTD2P86397 168 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 GNMTQ14749 295 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 SLC22A6Q4U2R8 563 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 C5orf24Q7Z6I8 188 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 ZNF554Q86TJ5 538 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 CCDC197Q8NCU1 140 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 OR52L2PQ8NGH6 319 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 YPEL2Q96QA6 119 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 TMED9Q9BVK6 235 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 FBXL15Q9H469 300 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 RANGRFQ9HD47 186 aaPredicted RBP7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 RETNQ9HD89 108 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 IMPAD1Q9NX62 359 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 ERVK13-1Q9NX77 482 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 ETAA1Q9NY74 926 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 JPT1Q9UK76 154 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 RNF150Q9ULK6 438 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 GAB2Q9UQC2 676 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 AP4S1Q9Y587 144 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 A3GALT2U3KPV4 340 aa7.59□□□□□ -1.19
CALCOCO2-227ENST00000575560 SAA2-SAA4A0A096LPE2 208 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 LCE2BO14633 110 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 TFAP2AP05549 437 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 SAA2P0DJI9 122 aaPredicted RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 ZP3P21754 424 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 PPP1CCP36873 323 aaKnown RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 MECP2P51608 486 aaKnown RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 GTF2A1P52655 376 aaPredicted RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 GBX2P52951 348 aaPredicted RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 GPR176Q14439 515 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 DDI2Q5TDH0 399 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 RAB12Q6IQ22 244 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 UNQ5815/PRO19632Q6UWF5 114 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 ZNF562Q6V9R5 426 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 GTSCR1Q86UQ5 136 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 LFNGQ8NES3 379 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 OR9G4Q8NGQ1 327 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 GPR148Q8TDV2 347 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 LINC00476Q8WZB0 136 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 TMEM106AQ96A25 262 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 MRPS24Q96EL2 167 aaKnown RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 CYYR1Q96J86 154 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 RDH12Q96NR8 316 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 S100A13Q99584 98 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 FAM110AQ9BQ89 295 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 FAM103A1Q9BTL3 118 aaKnown RBP7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 SIGLEC8Q9NYZ4 499 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 AASSQ9UDR5 926 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 OAZ3Q9UMX2 235 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 PEX16Q9Y5Y5 336 aa7.58□□□□□ -1.2
CALCOCO2-227ENST00000575560 IZUMO1RA6ND01 250 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 SNTNA6NMZ2 147 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 TRGV3P03979 118 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 GLAP06280 429 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 CD2P06729 351 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 CSN3P07498 182 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 CT45A6P0DMU7 189 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 CT45A5P0DMU8 189 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 CT45A7P0DMV0 189 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 SNRPBP14678 240 aaKnown RBP7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 IGFBP3P17936 291 aaPredicted RBP7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 GABRB1P18505 474 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 CD40LGP29965 261 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 BDKRB2P30411 391 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 PPP3R1P63098 170 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 PRR20EP86478 221 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 PRR20CP86479 221 aa7.57□□□□□ -1.2
CALCOCO2-227ENST00000575560 PRR20DP86480 221 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms