RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 CAPSLQ8WWF8 208 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 CFHR4Q92496 578 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 CMSS1Q9BQ75 279 aaKnown RBP10.87□□□□□ -0.67
CIITA-210ENST00000575513 GHITMQ9H3K2 345 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 ZNF702PQ9H963 129 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 SPATA2Q9UM82 520 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 IGHV1-3A0A0C4DH29 117 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 SERPINE3A8MV23 424 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 ITGB1BP1O14713 200 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 DIAPH2-AS1Q14236 149 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 SRSF7Q16629 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
CIITA-210ENST00000575513 PRR31Q5SQ13 230 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 CLVS1Q8IUQ0 354 aaPredicted RBP10.86□□□□□ -0.67
CIITA-210ENST00000575513 DRAM1Q8N682 238 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 OR10V1Q8NGI7 309 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 OR5H6Q8NGV6 325 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 RTN4IP1Q8WWV3 396 aaPredicted RBP10.86□□□□□ -0.67
CIITA-210ENST00000575513 CYYR1Q96J86 154 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 Q9N2K0 584 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.86□□□□□ -0.67
CIITA-210ENST00000575513 RHBDL2Q9NX52 303 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 KCNK7Q9Y2U2 307 aa10.86□□□□□ -0.67
CIITA-210ENST00000575513 TRRAPQ9Y4A5 3859 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 A0A0A6YYH2 397 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 A6NJ64 397 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 MFNGO00587 321 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 LANCL1O43813 399 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 DIRAS3O95661 229 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 CD3GP09693 182 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 HIST1H1DP16402 221 aaKnown RBP10.85□□□□□ -0.67
CIITA-210ENST00000575513 CD24P25063 80 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 CD1BP29016 333 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 KRTAP10-3P60369 221 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 BLCAPP62952 87 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 MRPS15P82914 257 aaKnown RBP10.85□□□□□ -0.67
CIITA-210ENST00000575513 MOGAT2Q3SYC2 334 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 FAM53AQ6NSI3 398 aaPredicted RBP10.85□□□□□ -0.67
CIITA-210ENST00000575513 Q6ZPA2 131 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 IZUMO1Q8IYV9 350 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 OR52L2PQ8NGH6 319 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 OR56B4Q8NH76 319 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 SLC25A38Q96DW6 304 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 ABHD14AQ9BUJ0 271 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 ATG5Q9H1Y0 275 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 DCSTAMPQ9H295 470 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 SERTAD4Q9NUC0 356 aa10.85□□□□□ -0.67
CIITA-210ENST00000575513 TRDCB7Z8K6 153 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 SLC31A2O15432 143 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 FGF16O43320 207 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 SNRNP70P08621 437 aaKnown RBP10.84□□□□□ -0.67
CIITA-210ENST00000575513 ZBTB25P24278 435 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 PPP1CCP36873 323 aaKnown RBP10.84□□□□□ -0.67
CIITA-210ENST00000575513 RORCP51449 518 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 HLA-DRB3P79483 266 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 FAM71F2Q6NXP2 309 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 MOB3BQ86TA1 216 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 TGIF2LXQ8IUE1 241 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 OR2AK2Q8NG84 335 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 SETD6Q8TBK2 473 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 IL1F10Q8WWZ1 152 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 ACOT12Q8WYK0 555 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 HDHD3Q9BSH5 251 aaPredicted RBP10.84□□□□□ -0.67
CIITA-210ENST00000575513 ABCG5Q9H222 651 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
CIITA-210ENST00000575513 AMY1AP04745 511 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 AMY2AP04746 511 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 GSTP1P09211 210 aaKnown RBP10.83□□□□□ -0.68
CIITA-210ENST00000575513 GNB3P16520 340 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 SRSF4Q08170 494 aaKnown RBP10.83□□□□□ -0.68
CIITA-210ENST00000575513 GNMTQ14749 295 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 KIR2DS1Q14954 304 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 HERPUD1Q15011 391 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 Q6ZS49 121 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 ODF3L1Q8IXM7 274 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 LYG1Q8N1E2 194 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 OR8H1Q8NGG4 311 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 OR4A4PQ8NGN8 299 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 OR2T10Q8NGZ9 312 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 WIPF2Q8TF74 440 aaPredicted RBP10.83□□□□□ -0.68
CIITA-210ENST00000575513 EDARADDQ8WWZ3 215 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 CMTM3Q96MX0 182 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 WNT10AQ9GZT5 417 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 TOLLIPQ9H0E2 274 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 PIPOXQ9P0Z9 390 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 SLC23A1Q9UHI7 598 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 MOB4Q9Y3A3 225 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
CIITA-210ENST00000575513 M0QZ24 198 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 RAB29O14966 203 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 NOL3O60936 208 aaKnown RBP10.82□□□□□ -0.68
CIITA-210ENST00000575513 IGKV1D-33P01593 117 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 IGKV1-33P01594 117 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 ZNF182P17025 639 aaPredicted RBP10.82□□□□□ -0.68
CIITA-210ENST00000575513 TMEM11P17152 192 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 CEACAM6P40199 344 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 VDAC2P45880 294 aaPredicted RBP10.82□□□□□ -0.68
CIITA-210ENST00000575513 REG1BP48304 166 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 PITPNAQ00169 270 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 HES1Q14469 280 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms