RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PITPNC1Q9UKF7 332 aa8.91□□□□□ -0.98
CHD3-216ENST00000573936 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
CHD3-216ENST00000573936 A3GALT2U3KPV4 340 aa8.91□□□□□ -0.98
CHD3-216ENST00000573936 TRAV18A0A075B6X5 111 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 CTDSP2O14595 271 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 DIRAS3O95661 229 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 FCGR3AP08637 254 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 HKR1P10072 659 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 ZBTB25P24278 435 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 COMPP49747 757 aaPredicted RBP8.9□□□□□ -0.98
CHD3-216ENST00000573936 GNG2P59768 71 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 FOXL1Q12952 345 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 LDLRAD2Q5SZI1 272 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 OLFML2AQ68BL7 652 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 SLC25A48Q6ZT89 311 aaKnown RBP8.9□□□□□ -0.98
CHD3-216ENST00000573936 OR8H3Q8N146 312 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 DYNAPQ8N1N2 210 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 SAMD12Q8N8I0 201 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 DTX3Q8N9I9 347 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 OR52L2PQ8NGH6 319 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 OR10V1Q8NGI7 309 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 OR4A4PQ8NGN8 299 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 IL1F10Q8WWZ1 152 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 TOMM40LQ969M1 308 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 CYYR1Q96J86 154 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 C6orf62Q9GZU0 229 aaPredicted RBP8.9□□□□□ -0.98
CHD3-216ENST00000573936 MIXL1Q9H2W2 232 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 MMP27Q9H306 513 aa8.9□□□□□ -0.98
CHD3-216ENST00000573936 CMYA5Q8N3K9 4069 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 TMEM89A2RUT3 159 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 FAM181BA6NEQ2 426 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 ITGB1BP1O14713 200 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 HSPA12AO43301 675 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 XRCC3O43542 346 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 GPR137BO60478 399 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 HPGDSO60760 199 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 GAPDHP04406 335 aaKnown RBP8.89□□□□□ -0.99
CHD3-216ENST00000573936 EIF4EP06730 217 aaKnown RBP8.89□□□□□ -0.99
CHD3-216ENST00000573936 ZNF816Q0VGE8 651 aaPredicted RBP8.89□□□□□ -0.99
CHD3-216ENST00000573936 PLA1AQ53H76 456 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 UTF1Q5T230 341 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 Q6ZS49 121 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 LAX1Q8IWV1 398 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 ZNF439Q8NDP4 499 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 PIFOQ8TCI5 191 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 EDARADDQ8WWZ3 215 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 ABHD14AQ9BUJ0 271 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 GHITMQ9H3K2 345 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 TGP01266 2768 aa8.89□□□□□ -0.99
CHD3-216ENST00000573936 A0A1W2PPE3 182 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 TMEM235A6NFC5 223 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 HSD17B6O14756 317 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 RGS5O15539 181 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 FABP7O15540 132 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 TXNL1O43396 289 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 APOA1P02647 267 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 SCTP09683 121 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 CTXN2P0C2S0 81 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 ELK1P19419 428 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 PAX6P26367 422 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 PPP1CCP36873 323 aaKnown RBP8.88□□□□□ -0.99
CHD3-216ENST00000573936 CEACAM6P40199 344 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 CBX5P45973 191 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 ZNF134P52741 427 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 GNMTQ14749 295 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 LY6EQ16553 131 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 CT45A1Q5HYN5 189 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 DHRS7BQ6IAN0 325 aaPredicted RBP8.88□□□□□ -0.99
CHD3-216ENST00000573936 Q6ZPA2 131 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 THNSL2Q86YJ6 484 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 OR2AK2Q8NG84 335 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 CT45A3Q8NHU0 189 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 TOLLIPQ9H0E2 274 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 AUNIPQ9H7T9 357 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 PIPOXQ9P0Z9 390 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 SLC23A1Q9UHI7 598 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
CHD3-216ENST00000573936 KIAA2026Q5HYC2 2103 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 A0A1B0GUS0 222 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 A6NDX4 124 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 SLC31A2O15432 143 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 LANCL1O43813 399 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 NDUFA7O95182 113 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 FAM106CPP0CH98 169 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 RAB13P51153 203 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 ZNF137PP52743 207 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 TMEM69Q5SWH9 247 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 FAM53AQ6NSI3 398 aaPredicted RBP8.87□□□□□ -0.99
CHD3-216ENST00000573936 C16orf82Q7Z2V1 217 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 C5orf24Q7Z6I8 188 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 IZUMO1Q8IYV9 350 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 LYG1Q8N1E2 194 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 OR6Q1Q8NGQ2 317 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 OR4F5Q8NH21 305 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 NUDCD2Q8WVJ2 157 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 CAPSLQ8WWF8 208 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 ST6GALNAC6Q969X2 333 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 AKR1E2Q96JD6 320 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 CABLES2Q9BTV7 478 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms