RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 CXorf51AA0A1B0GTR3 108 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 M0R143 59 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 NPPCP23582 126 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 CX3CL1P78423 397 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 MYEOVQ96EZ4 313 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 ALKBH7Q9BT30 221 aaPredicted RBP8.26□□□□□ -1.09
USP6-204ENST00000572949 SIGLEC7Q9Y286 467 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 TRBV5-4A0A0C4DH59 114 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 PYCARD-AS1I3L0S3 204 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 TRGV3P03979 118 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 SFTA3P0C7M3 94 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 JUNBP17275 347 aaPredicted RBP8.26□□□□□ -1.09
USP6-204ENST00000572949 B2MP61769 119 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 ST3GAL2Q16842 350 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 DUX3Q96PT4 197 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 SFXN3Q9BWM7 321 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 SPNS1Q9H2V7 528 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 IGHV1-69-2A0A0G2JMI3 117 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 COL6A6A6NMZ7 2263 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 TDGF1P13385 188 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 LCN2P80188 198 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 PRSS54Q6PEW0 395 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 MRGPRFQ96AM1 343 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
USP6-204ENST00000572949 ASAH1Q13510 395 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 FOXC2Q99958 501 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 PRSS50Q9UI38 385 aa8.26□□□□□ -1.09
USP6-204ENST00000572949 CACNA1IQ9P0X4 2223 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 NTN1O95631 604 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 EVX1P49640 407 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 MPV17LQ2QL34 196 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 WNT2BQ93097 391 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ZNF385DQ9H6B1 395 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 PEMTQ9UBM1 199 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 B9A039 149 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 CEACAM4O75871 244 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 HPXP02790 462 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 PTHLHP12272 177 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 CKS2P33552 79 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 NOVP48745 357 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ACVR1Q04771 509 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ZBTB34Q8NCN2 500 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 VDAC2P45880 294 aaPredicted RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 NMUP48645 174 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 IL24Q13007 206 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 TGIF1Q15583 401 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 CLLU1Q5K131 121 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 GPR82Q96P67 336 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 C7orf69Q9H7B7 122 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 CHD5Q8TDI0 1954 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 CRPP02741 224 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 DRD3P35462 400 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 POLR2GP62487 172 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP6-204ENST00000572949 GCSAMLQ5JQS6 135 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ZNF770Q6IQ21 691 aaPredicted RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 TMEM251Q8N6I4 163 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 RAB33BQ9H082 229 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 A0A1W2PPC1 479 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 RBFOX2O43251 390 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP6-204ENST00000572949 CYB5R3P00387 301 aaPredicted RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 CTF1Q16619 201 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 GAPTQ8N292 157 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 FGF20Q9NP95 211 aaPredicted RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 MED19A0JLT2 244 aaPredicted RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 ZNF253O75346 499 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 SFT2D2O95562 160 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 APCSP02743 223 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ZNF688P0C7X2 276 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ISL1P61371 349 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 ERVS71-1P61550 626 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 FAM209BQ5JX69 171 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
USP6-204ENST00000572949 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 CBLN3Q6UW01 205 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 STHQ8IWL8 128 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 SLC25A37Q9NYZ2 338 aa8.25□□□□□ -1.09
USP6-204ENST00000572949 TRAV30A0A087WSZ9 112 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 SYNGR3O43761 229 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 ADAP1O75689 374 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 SLC35E3Q7Z769 313 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 LINC01555Q8NAE3 123 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 A6NDN8 102 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 PSG9Q00887 426 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 TMEM255AQ5JRV8 349 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 OR2W1Q9Y3N9 320 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 SOX21Q9Y651 276 aaPredicted RBP8.24□□□□□ -1.09
USP6-204ENST00000572949 A0A0G2JLM5 398 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 HOXA3O43365 443 aaPredicted RBP8.24□□□□□ -1.09
USP6-204ENST00000572949 PGA4P0DJD7 388 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 PGA5P0DJD9 388 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 LINC00303Q3SY05 128 aa8.24□□□□□ -1.09
USP6-204ENST00000572949 TSPO2Q5TGU0 170 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms