RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 FAIM2Q9BWQ8 316 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 TAPBPLQ9BX59 468 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 PRRG3Q9BZD7 231 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 EGLN1Q9GZT9 426 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 HDHD2Q9H0R4 259 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ABCB9Q9NP78 766 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 AIG1Q9NVV5 245 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 NDUFB11Q9NX14 153 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 IL19Q9UHD0 177 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 MRTO4Q9UKD2 239 aaKnown RBP4.24□□□□□ -1.73
SF3B3-214ENST00000572365 MRPS28Q9Y2Q9 187 aaKnown RBP4.24□□□□□ -1.73
SF3B3-214ENST00000572365 FLVCR1Q9Y5Y0 555 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ETV7Q9Y603 341 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ARRDC5A6NEK1 342 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 SRRM4A7MD48 611 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 GPR171O14626 319 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ITGB1BP1O14713 200 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 TRAF3IP2O43734 574 aaPredicted RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 HPGDSO60760 199 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ENTPD6O75354 484 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 FOXH1O75593 365 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 OR4F21O95013 312 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 AKR7A3O95154 331 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 NXPH2O95156 264 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 WISP3O95389 354 aaPredicted RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 AK1P00568 194 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 TCRBP04435 133 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 HLA-DPB1P04440 258 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 IL5P05113 134 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CD2P06729 351 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 SFTPBP07988 381 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 OR4E1P0C645 316 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 PRPS2P11908 318 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 RPA2P15927 270 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CBR1P16152 277 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF14P17017 642 aaPredicted RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ACKR3P25106 362 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 FAUP35544 74 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CRYBB2P43320 205 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CRIP2P52943 208 aaPredicted RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CEBPGP53567 150 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CYCSP99999 105 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 PAX8Q06710 450 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 PDZK1IP1Q13113 114 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 C10orf91Q5T1B1 145 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 OR4F3Q6IEY1 312 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 LAIR2Q6ISS4 152 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 FAHD1Q6P587 224 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 LRRN1Q6UXK5 716 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 DLEU7Q6UYE1 221 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF730Q6ZMV8 503 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF329Q86UD4 541 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 NAA40Q86UY6 237 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 TPRA1Q86W33 373 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ANGPTL5Q86XS5 388 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 C17orf78Q8N4C9 275 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 LINC00471Q8N535 108 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ADAD2Q8NCV1 583 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 OR10A6Q8NH74 314 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 COQ8AQ8NI60 647 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 MUC7Q8TAX7 377 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 SLC7A13Q8TCU3 470 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 GEMIN6Q8WXD5 167 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CDS1Q92903 461 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 RAB1CQ92928 201 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ARL11Q969Q4 196 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 MRPS24Q96EL2 167 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ATOH8Q96SQ7 321 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 B9D2Q9BPU9 175 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 OVOL2Q9BRP0 275 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ABCG5Q9H222 651 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 GAL3ST2Q9H3Q3 398 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 UBQLN4Q9NRR5 601 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 ZCCHC3Q9NUD5 404 aaKnown RBP4.23□□□□□ -1.73
SF3B3-214ENST00000572365 VNN3Q9NY84 501 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
SF3B3-214ENST00000572365 TRBV2A0A0J9YWF9 115 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 KANTRA0A1W2PQU2 76 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 A0A1W2PRD5 423 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 A0A1W2PRF3 423 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 A0A1W2PRM7 423 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 TMEM72A0PK05 275 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 MCRIP1C9JLW8 97 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 E9PQ18 207 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 CREBL2O60519 120 aaPredicted RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 OR2F2O95006 317 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 OR2A4O95047 310 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 CDRT1O95170 752 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 MPC2O95563 127 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 IGHMP01871 453 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 OR8G3PP0DMU2 310 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 CD28P10747 220 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 HIST1H1BP16401 226 aaKnown RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 AHCYP23526 432 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 DDTP30046 118 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 PTGFRP43088 359 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 GLP1RP43220 463 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 PITPNBP48739 271 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 NUTF2P61970 127 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms