RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ZNF735P0CB33 412 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 CCL3L1P16619 93 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 BTCP35070 178 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 RFX2P48378 723 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 ARPC4P59998 168 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 CDK10Q15131 360 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 ACTBL2Q562R1 376 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 KLF17Q5JT82 389 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-209ENST00000571558 ZNF660Q6AZW8 331 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-209ENST00000571558 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 OR5H2Q8NGV7 314 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 DMRTB1Q96MA1 342 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 ZNF48Q96MX3 618 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-209ENST00000571558 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 MS4A7Q9GZW8 240 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-209ENST00000571558 C11orf54Q9H0W9 315 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-209ENST00000571558 TRBV6-7A0A0A0MS04 114 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 LINC00854A0A1B0GVQ3 168 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 C17orf98A8MV24 154 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 SPINT2O43291 252 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 RAB3DO95716 219 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 ZNF728P0DKX0 622 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 INPP1P49441 399 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 HTD2P86397 168 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 MEF2DQ14814 521 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 RNASE10Q5GAN6 216 aaKnown RBP11.19□□□□□ -0.62
RPAIN-209ENST00000571558 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 OR56B4Q8NH76 319 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 GALMQ96C23 342 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 CITED1Q99966 193 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 GAL3ST2Q9H3Q3 398 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 NECAP2Q9NVZ3 263 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 INSIG2Q9Y5U4 225 aa11.19□□□□□ -0.62
RPAIN-209ENST00000571558 IGHV2-70DA0A0C4DH43 119 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 SDCBPO00560 298 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-209ENST00000571558 LYRM1O43325 122 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 MMP23AO75900 390 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 RBP4P02753 201 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 LIPFP07098 398 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 OR5H8P0DN80 308 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 OMGP23515 440 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 OR3A3P47888 321 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 LOXL3P58215 753 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 ERVFRD-1P60508 538 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 UTF1Q5T230 341 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 DHRS11Q6UWP2 260 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 HEPN1Q6WQI6 88 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 BCL6BQ8N143 479 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-209ENST00000571558 ARRDC1Q8N5I2 433 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 OR10A7Q8NGE5 316 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 C7orf50Q9BRJ6 194 aaKnown RBP11.18□□□□□ -0.62
RPAIN-209ENST00000571558 TOLLIPQ9H0E2 274 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 MMP26Q9NRE1 261 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 SLC2A8Q9NY64 477 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 EHFQ9NZC4 300 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 OR1A1Q9P1Q5 309 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 CMYA5Q8N3K9 4069 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 KIAA2026Q5HYC2 2103 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 BET1O15155 118 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 ENSAO43768 121 aaKnown RBP11.18□□□□□ -0.62
RPAIN-209ENST00000571558 TUSC2O75896 110 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 GNMTQ14749 295 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 TMEM30BQ3MIR4 351 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-209ENST00000571558 C1orf122Q6ZSJ8 110 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 KIR3DL3Q8N743 410 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 Q8N7P7 452 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 OR52M1Q8NGK5 317 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 IL1F10Q8WWZ1 152 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 MRGPRFQ96AM1 343 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 PRDM13Q9H4Q3 707 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 RAB9BQ9NP90 201 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 IDI2-AS1Q9NZ38 188 aa11.18□□□□□ -0.62
RPAIN-209ENST00000571558 DOCK11Q5JSL3 2073 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 A0A1W2PPH5 198 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 NAP1L6A6NFF2 107 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 M0R1W7 72 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 AMY2AP04746 511 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 CRYBA1P05813 215 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 SLC6A1P30531 599 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 FAUP35544 74 aaKnown RBP11.17□□□□□ -0.62
RPAIN-209ENST00000571558 RPL15P61313 204 aaKnown RBP11.17□□□□□ -0.62
RPAIN-209ENST00000571558 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-209ENST00000571558 AADACL3Q5VUY0 350 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 LHFPL1Q86WI0 220 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 H1FOOQ8IZA3 346 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-209ENST00000571558 OR52L2PQ8NGH6 319 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 OR51S1Q8NGJ8 323 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 OR10J5Q8NHC4 309 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 GIMAP1Q8WWP7 306 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 OR2S2Q9NQN1 319 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 GFOD1Q9NXC2 390 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 SLC23A1Q9UHI7 598 aa11.17□□□□□ -0.62
RPAIN-209ENST00000571558 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms