RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ICE1Q9Y2F5 2266 aa5.41□□□□□ -1.54
CTDNEP1-204ENST00000570484 DOPEY2Q9Y3R5 2298 aa5.41□□□□□ -1.54
CTDNEP1-204ENST00000570484 UTP20O75691 2785 aaKnown RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 TRBV6-7A0A0A0MS04 114 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGHV2-26A0A0B4J1V2 119 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 C17orf98A8MV24 154 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 YPEL1O60688 119 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 PTTG1O95997 202 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 PPYP01298 95 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGHV4-31P0DP07 118 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 HNF1AP20823 631 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 LUMP51884 338 aaPredicted RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 ARHGDIBP52566 201 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 PRRX1P54821 245 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 LGALS4P56470 323 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 HERPUD1Q15011 391 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 RBMS2Q15434 407 aaKnown RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 CR1LQ2VPA4 569 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 Q3ZCU0 254 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 GPR157Q5UAW9 335 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 C11orf88Q6PI97 169 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 OVCH2Q7RTZ1 564 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 CMTM1Q8IZ96 169 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 H1FOOQ8IZA3 346 aaPredicted RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 ABHD12Q8N2K0 398 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 PNKDQ8N490 385 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR4D10Q8NGI6 311 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR9G1Q8NH87 305 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF596Q8TC21 504 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 SECTM1Q8WVN6 248 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 TNFRSF14Q92956 283 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 DACT3Q96B18 629 aaPredicted RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 MSI2Q96DH6 328 aaKnown RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 YPEL2Q96QA6 119 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 FXYD6Q9H0Q3 95 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 C11orf54Q9H0W9 315 aaPredicted RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR2D2Q9H210 308 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 SLC2A8Q9NY64 477 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 COPZ2Q9P299 210 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF221Q9UK13 617 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 PSG11Q9UQ72 335 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 C14orf166Q9Y224 244 aaKnown RBP5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR2W1Q9Y3N9 320 aa5.4□□□□□ -1.54
CTDNEP1-204ENST00000570484 PTPN13Q12923 2485 aa5.4□□□□□ -1.55
CTDNEP1-204ENST00000570484 UNC79Q9P2D8 2635 aa5.4□□□□□ -1.55
CTDNEP1-204ENST00000570484 HECTD1Q9ULT8 2610 aa5.4□□□□□ -1.55
CTDNEP1-204ENST00000570484 DYSFO75923 2080 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 CACNA1DQ01668 2161 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 TRAV40A0A0B4J280 105 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGKV1-6A0A0C4DH72 117 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC22A5O76082 557 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGHV3-7P01780 117 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 RLN1P04808 185 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 ARG1P05089 322 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 AADACP22760 399 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 PRTN3P24158 256 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 CEACAM3P40198 252 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 GPR12P47775 334 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 DLX6P56179 175 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 CBX3Q13185 183 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 SURF2Q15527 256 aaPredicted RBP5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 TRIM16LQ309B1 348 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 LPCAT3Q6P1A2 487 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 PLET1Q6UQ28 207 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 C1orf122Q6ZSJ8 110 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 TMED4Q7Z7H5 227 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 PDZD9Q8IXQ8 264 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC38A6Q8IZM9 456 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 LYG1Q8N1E2 194 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 CCDC71LQ8N9Z2 235 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZFAND1Q8TCF1 268 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZFAND2BQ8WV99 257 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 GIMAP1Q8WWP7 306 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 LEAP2Q969E1 77 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 LHX4Q969G2 390 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 CREB3L1Q96BA8 519 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 MOB3AQ96BX8 217 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 C1orf159Q96HA4 380 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 C18orf12Q96KH6 178 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC25A21Q9BQT8 299 aaPredicted RBP5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC5A7Q9GZV3 580 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 SIRPDQ9H106 197 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 C20orf85Q9H1P6 137 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 MMP28Q9H239 520 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 LINC00574Q9H8X3 128 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 MMP26Q9NRE1 261 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 PIPOXQ9P0Z9 390 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 TBC1D24Q9ULP9 559 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 NAV2Q8IVL1 2488 aa5.39□□□□□ -1.55
CTDNEP1-204ENST00000570484 DSCAMO60469 2012 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 ARFGEF3Q5TH69 2177 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 RTTNQ86VV8 2226 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 ABCA4P78363 2273 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 A0A087X0M5 115 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 A0A1B0GX30 115 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 A0A1W2PPE3 182 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 RNF212BA8MTL3 300 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 HSD17B6O14756 317 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 TXNL1O43396 289 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms