RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 LINC01356Q8N9X3 169 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 SECTM1Q8WVN6 248 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 EDARADDQ8WWZ3 215 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 KCNS2Q9ULS6 477 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 RLN1P04808 185 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 UTF1Q5T230 341 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 Q8N7P7 452 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 ZDHHC22Q8N966 263 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 UPRTQ96BW1 309 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SCGB3A2Q96PL1 93 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 ABHD14AQ9BUJ0 271 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SLC5A7Q9GZV3 580 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 TMEM133Q9H2Q1 129 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 METTL8Q9H825 291 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SIRT7Q9NRC8 400 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 FLVCR2Q9UPI3 526 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 PSG11Q9UQ72 335 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 INSIG2Q9Y5U4 225 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 TRAV20A0A0B4J274 112 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 A0A1W2PPE3 182 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SLC31A2O15432 143 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 H2AFB2P0C5Z0 115 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 COX7A1P24310 79 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 DLX1P56177 255 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 PRB3Q04118 309 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 TMEM249Q2WGJ8 235 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 Q3ZCU0 254 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 LY6G6FQ5SQ64 297 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 TMED4Q7Z7H5 227 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SLC38A6Q8IZM9 456 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 CREB3L1Q96BA8 519 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 OR2D2Q9H210 308 aa12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 C14orf166Q9Y224 244 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-219ENST00000570273 PRRC2AP48634 2157 aaKnown RBP12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 ABCA2Q9BZC7 2435 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 MAP1AP78559 2803 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 HSD17B6O14756 317 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 IGHV4-31P0DP07 118 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 PRTN3P24158 256 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 GZMKP49863 264 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 RAB7AP51149 207 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 UCP3P55916 312 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 RAB25P57735 213 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 DCAF12L2Q5VW00 463 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 C1orf122Q6ZSJ8 110 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 LDLRAD3Q86YD5 345 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 ZNF439Q8NDP4 499 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 OR13D1Q8NGV5 346 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 ZFAND1Q8TCF1 268 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 FAM216AQ8WUB2 273 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 TMEM186Q96B77 213 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 PCGF1Q9BSM1 259 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 RNF150Q9ULK6 438 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 DOCK11Q5JSL3 2073 aa12.61□□□□□ -0.39
HERPUD1-219ENST00000570273 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 A0A087X0M5 115 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 IGHV2-26A0A0B4J1V2 119 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 A0A1B0GX30 115 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 ITGB1BP1O14713 200 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 TOX4O94842 621 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 CTSDP07339 412 aaPredicted RBP12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 PI3P19957 117 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 CD34P28906 385 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 KLRD1Q13241 179 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 ABCA11PQ4W5N1 156 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 LPCAT3Q6P1A2 487 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 ABHD12Q8N2K0 398 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 OR9G1Q8NH87 305 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 CLEC7AQ9BXN2 247 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 IFI27L2Q9H2X8 130 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 HEXA-AS1Q9H8Q6 139 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 CCL28Q9NRJ3 127 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 HIF1ANQ9NWT6 349 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 GPR132Q9UNW8 380 aa12.6□□□□□ -0.39
HERPUD1-219ENST00000570273 MED13LQ71F56 2210 aa12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 GPR31O00270 319 aa12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 TOR1AO14656 332 aa12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 SMAD7O15105 426 aaKnown RBP12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 MMP9P14780 707 aa12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 ZNF16P17020 682 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 HOXB4P17483 251 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-219ENST00000570273 ANXA7P20073 488 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms