RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 NABP2Q9BQ15 211 aa16.34■□□□□ 0.21
PKD1-240ENST00000570253 MRPL20Q9BYC9 149 aaKnown RBP16.34■□□□□ 0.21
PKD1-240ENST00000570253 EXOSC1Q9Y3B2 195 aaKnown RBP16.34■□□□□ 0.21
PKD1-240ENST00000570253 UBE2QL1A1L167 161 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 OGG1O15527 345 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 YPEL1O60688 119 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 MAS1P04201 325 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 SPNP16150 400 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 MGMTP16455 207 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 ETV1P50549 477 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 ADARB1P78563 741 aaKnown RBP16.33■□□□□ 0.2
PKD1-240ENST00000570253 HTD2P86397 168 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 KIAA0141Q14154 515 aaPredicted RBP16.33■□□□□ 0.2
PKD1-240ENST00000570253 CDH26Q8IXH8 852 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 MINDY2Q8NBR6 621 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 OR52L2PQ8NGH6 319 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 OR13C5Q8NGS8 318 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 DLX4Q92988 240 aaPredicted RBP16.33■□□□□ 0.2
PKD1-240ENST00000570253 FLYWCH2Q96CP2 140 aaKnown RBP16.33■□□□□ 0.2
PKD1-240ENST00000570253 YPEL2Q96QA6 119 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 BANF2Q9H503 90 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 ABRACLQ9P1F3 81 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 STEAP1Q9UHE8 339 aa16.33■□□□□ 0.2
PKD1-240ENST00000570253 FOXA2Q9Y261 457 aaPredicted RBP16.33■□□□□ 0.2
PKD1-240ENST00000570253 TRBV5-5A0A0J9YX44 114 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 H3BNX3 289 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 ARPC1BO15143 372 aaKnown RBP16.32■□□□□ 0.2
PKD1-240ENST00000570253 SC5DO75845 299 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 LGALS1P09382 135 aaKnown RBP16.32■□□□□ 0.2
PKD1-240ENST00000570253 CNTFRP26992 372 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 PPP1CCP36873 323 aaKnown RBP16.32■□□□□ 0.2
PKD1-240ENST00000570253 CAPGP40121 348 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 SLURP1P55000 103 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 ZNF660Q6AZW8 331 aaPredicted RBP16.32■□□□□ 0.2
PKD1-240ENST00000570253 NPBQ8NG41 125 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 ELOVL1Q9BW60 279 aa16.32■□□□□ 0.2
PKD1-240ENST00000570253 MBNL3Q9NUK0 354 aaKnown RBP16.32■□□□□ 0.2
PKD1-240ENST00000570253 NDUFA3O95167 84 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 GNMTQ14749 295 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 SRSF7Q16629 238 aaKnown RBP eCLIP16.31■□□□□ 0.2
PKD1-240ENST00000570253 LY6G6FQ5SQ64 297 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 FAM71F2Q6NXP2 309 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 ZNF833PQ6ZTB9 187 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 NKAIN3Q8N8D7 197 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 APH1BQ8WW43 257 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 THRSPQ92748 146 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 RBMXL1Q96E39 390 aaKnown RBP16.31■□□□□ 0.2
PKD1-240ENST00000570253 RDH12Q96NR8 316 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 TOLLIPQ9H0E2 274 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 PIPOXQ9P0Z9 390 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 DIMT1Q9UNQ2 313 aaKnown RBP16.31■□□□□ 0.2
PKD1-240ENST00000570253 A3GALT2U3KPV4 340 aa16.31■□□□□ 0.2
PKD1-240ENST00000570253 DYNC1I1O14576 645 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 PDCD6O75340 191 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 TAS2R43P59537 309 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 ACSM6Q6P461 480 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 ARPC1AQ92747 370 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 Q96M66 194 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 NEDD4LQ96PU5 975 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 ALX4Q9H161 411 aaPredicted RBP16.3■□□□□ 0.2
PKD1-240ENST00000570253 GHRLQ9UBU3 117 aa16.3■□□□□ 0.2
PKD1-240ENST00000570253 TRAV8-7A0A075B6U6 113 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 SAA2-SAA4A0A096LPE2 208 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 MAGEA13PA6NCF6 341 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 GSTP1P09211 210 aaKnown RBP16.29■□□□□ 0.2
PKD1-240ENST00000570253 SAA2P0DJI9 122 aaPredicted RBP16.29■□□□□ 0.2
PKD1-240ENST00000570253 SMN1Q16637 294 aaKnown RBP16.29■□□□□ 0.2
PKD1-240ENST00000570253 DMKNQ6E0U4 476 aaPredicted RBP16.29■□□□□ 0.2
PKD1-240ENST00000570253 SGPP2Q8IWX5 399 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 MRPL30Q8TCC3 161 aaKnown RBP16.29■□□□□ 0.2
PKD1-240ENST00000570253 ISOC1Q96CN7 298 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 OR14A2Q96R54 314 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 CITED4Q96RK1 184 aa16.29■□□□□ 0.2
PKD1-240ENST00000570253 HUWE1Q7Z6Z7 4374 aaKnown RBP16.29■□□□□ 0.2
PKD1-240ENST00000570253 IGHV4OR15-8A0A075B7B6 117 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 A0A087WW49 117 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 A0A1W2PPK0 400 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 OR5H14A6NHG9 310 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 H7C2Y5 167 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 RRHO14718 337 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 RAB29O14966 203 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 LDLRAD4O15165 306 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 HSPB1P04792 205 aaKnown RBP16.28■□□□□ 0.2
PKD1-240ENST00000570253 MAPK3P27361 379 aaPredicted RBP16.28■□□□□ 0.2
PKD1-240ENST00000570253 MC5RP33032 325 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 OR3A3P47888 321 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 CRIP2P52943 208 aaPredicted RBP16.28■□□□□ 0.2
PKD1-240ENST00000570253 FAM131AQ6UXB0 335 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 LYPD6Q86Y78 171 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 ODF3L1Q8IXM7 274 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 IL1F10Q8WWZ1 152 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 TMEM80Q96HE8 168 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 RITA1Q96K30 269 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 UQCC2Q9BRT2 126 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 FBXL15Q9H469 300 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 SLA2Q9H6Q3 261 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 STUB1Q9UNE7 303 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 DNAH7Q8WXX0 4024 aa16.28■□□□□ 0.2
PKD1-240ENST00000570253 TRIM64CA6NLI5 447 aa16.27■□□□□ 0.2
PKD1-240ENST00000570253 RBBP9O75884 186 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms