RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 SH2D1BO14796 132 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 ARPC1BO15143 372 aaKnown RBP4.53□□□□□ -1.68
UBFD1-209ENST00000569919 ATP6V0E1O15342 81 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 SNX3O60493 162 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CIDEAO60543 219 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 PRAF2O60831 178 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 FCGR3BO75015 233 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 HAND1O96004 215 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 IFNGP01579 166 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 IGKV1D-33P01593 117 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 IGKV1-33P01594 117 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 RLN1P04808 185 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 OR8U9P0C7N5 309 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CLUP10909 449 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 NUDT2P50583 147 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CDC42P60953 191 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 LIPEQ05469 1076 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 MADCAM1Q13477 382 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 KIAA0141Q14154 515 aaPredicted RBP4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CRMP1Q14194 572 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 TMEM42Q69YG0 159 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 DEGS2Q6QHC5 323 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 BAIAP2L2Q6UXY1 529 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 TRPM8Q7Z2W7 1104 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 ARPINQ7Z6K5 226 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 ANGPTL5Q86XS5 388 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 Q8IYB0 196 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 BATF2Q8N1L9 274 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 RNF148Q8N7C7 305 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 MYOZ3Q8TDC0 251 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CEP19Q96LK0 163 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 AMELYQ99218 206 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 RASL11BQ9BPW5 248 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CHST6Q9GZX3 395 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 EGLN3Q9H6Z9 239 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CMTM6Q9NX76 183 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 MTCH1Q9NZJ7 389 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 ZNF580Q9UK33 172 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 CDH10Q9Y6N8 788 aa4.53□□□□□ -1.68
UBFD1-209ENST00000569919 SACSQ9NZJ4 4579 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 FAM183AA6NL82 134 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 RIIAD1A6NNX1 92 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 C12orf77C9JDV5 145 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 LINC01619G3V211 115 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 NDUFAB1O14561 156 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 ST8SIA3O43173 380 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 SELENOFO60613 162 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 GMNNO75496 209 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 DHRS3O75911 302 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 DIRAS1O95057 198 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 GAPDHP04406 335 aaKnown RBP4.52□□□□□ -1.69
UBFD1-209ENST00000569919 IGF1P05019 195 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 NFYBP25208 207 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 PTGFRP43088 359 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
UBFD1-209ENST00000569919 GLIPR1P48060 266 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 RAB9AP51151 201 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 PITPNAQ00169 270 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 ZNF146Q15072 292 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 RNLSQ5VYX0 342 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 OR4A47Q6IF82 309 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 RASSF6Q6ZTQ3 369 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 MOB3BQ86TA1 216 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 TRPT1Q86TN4 253 aaKnown RBP4.52□□□□□ -1.69
UBFD1-209ENST00000569919 STPG4Q8N801 248 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 ZNF565Q8N9K5 539 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 Q8N9W7 124 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 UXS1Q8NBZ7 420 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 OR2T10Q8NGZ9 312 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 OR51E1Q8TCB6 317 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 TLCD1Q96CP7 247 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 KCTD7Q96MP8 289 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 TEAD3Q99594 435 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 SIKE1Q9BRV8 207 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 ST6GALNAC5Q9BVH7 336 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 TSSK6Q9BXA6 273 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 PBOV1Q9GZY1 135 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 GPR84Q9NQS5 396 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 GPR173Q9NS66 373 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 ACTR3BQ9P1U1 418 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 MRM2Q9UI43 246 aaKnown RBP4.52□□□□□ -1.69
UBFD1-209ENST00000569919 SAMD4AQ9UPU9 718 aaKnown RBP4.52□□□□□ -1.69
UBFD1-209ENST00000569919 MRPS28Q9Y2Q9 187 aaKnown RBP4.52□□□□□ -1.69
UBFD1-209ENST00000569919 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
UBFD1-209ENST00000569919 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 KBTBD11-OT1A0A1B0GTJ5 212 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 FAM230AA0A1W2PPH8 454 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 DHRS7CA6NNS2 312 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 F8VVB4 439 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 F8VWA3 439 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 H0Y980 276 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 ZNF254O75437 659 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 IGLV1-51P01701 117 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 IGLV3-1P01715 115 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 ZNF3P17036 446 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 CD1BP29016 333 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 RRM2P31350 389 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 SOX6P35712 828 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 OR3A1P47881 315 aa4.51□□□□□ -1.69
UBFD1-209ENST00000569919 GNB1P62873 340 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms