RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ZNF107Q9UII5 783 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 ZNF580Q9UK33 172 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 IGF1P05019 195 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 DCTN2Q13561 401 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 GNMTQ14749 295 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 KIR2DS1Q14954 304 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 OR10K2Q6IF99 312 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 UFD1Q92890 307 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 HSPB9Q9BQS6 159 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 SULT4A1Q9BR01 284 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 CHMP1AQ9HD42 196 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 TPRKBQ9Y3C4 175 aa17.69■□□□□ 0.42
RBFOX1-219ENST00000569895 WI2-2373I1.2A0A1W2PRP0 233 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 BPNT1O95861 308 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 IGHG4P01861 327 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 RAB25P57735 213 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 HMGN3Q15651 99 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 C6orf201Q7Z4U5 140 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 OR6M1Q8NGM8 313 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 RAX2Q96IS3 184 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 TM2D1Q9BX74 207 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 RIMS4Q9H426 269 aaPredicted RBP17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 PLEKHJ1Q9NW61 149 aa17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 LSM2Q9Y333 95 aaKnown RBP17.68■□□□□ 0.42
RBFOX1-219ENST00000569895 SLC22A1O15245 554 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 UCHL1P09936 223 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 BLVRBP30043 206 aaPredicted RBP17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 RANBP1P43487 201 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 ACTBP60709 375 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 LCNL1Q6ZST4 164 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 ODF3L1Q8IXM7 274 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 IL1F10Q8WWZ1 152 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 KCTD7Q96MP8 289 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 NABP2Q9BQ15 211 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 URM1Q9BTM9 101 aaKnown RBP17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 PIPOXQ9P0Z9 390 aa17.67■□□□□ 0.42
RBFOX1-219ENST00000569895 CD37P11049 281 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 SLC2A2P11168 524 aaPredicted RBP17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 MYF6P23409 242 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 CFHR3Q02985 330 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 TRAM1Q15629 374 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 LIPKQ5VXJ0 399 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 FAM71F2Q6NXP2 309 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 TMEM65Q6PI78 240 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 ZNF833PQ6ZTB9 187 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 MOB1BQ7L9L4 216 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 OR5M8Q8NGP6 311 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 DUX3Q96PT4 197 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 MRPL20Q9BYC9 149 aaKnown RBP17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 KIAA1456Q9P272 454 aa17.66■□□□□ 0.42
RBFOX1-219ENST00000569895 TMEM14DPA8MWL7 114 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 NBR2O15453 112 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 DGCR2P98153 550 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 SETD6Q8TBK2 473 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 C4orf3Q8WVX3 66 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 TMEM203Q969S6 136 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 GHITMQ9H3K2 345 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 PLGRKTQ9HBL7 147 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 MGAT4AQ9UM21 535 aa17.65■□□□□ 0.42
RBFOX1-219ENST00000569895 SAA2-SAA4A0A096LPE2 208 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 RAB29O14966 203 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 RAMP3O60896 148 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 ARL6IP5O75915 188 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 NAPSAO96009 420 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 HLA-DRB1P01911 266 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 HSMCR30P0CW71 290 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 SAA2P0DJI9 122 aaPredicted RBP17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 ARSBP15848 533 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 PSMA1P25786 263 aaKnown RBP17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 PSMB8P28062 276 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 UNC119Q13432 240 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 IRF3Q14653 427 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 VAX1Q5SQQ9 334 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 LIN54Q6MZP7 749 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 C5orf24Q7Z6I8 188 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 SVOPQ8N4V2 548 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 NICN1Q9BSH3 213 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 OR51J1Q9H342 316 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 ISYNA1Q9NPH2 558 aa17.64■□□□□ 0.41
RBFOX1-219ENST00000569895 ANKRD65E5RJM6 399 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 OR3A3P47888 321 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 QRFPP83859 136 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 TPBGQ13641 420 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 DEFB136Q30KP8 78 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 ZNF880Q6PDB4 577 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 NPBQ8NG41 125 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 RBMXL1Q96E39 390 aaKnown RBP17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 CYYR1Q96J86 154 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 NKX1-2Q9UD57 310 aaPredicted RBP17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 SLC23A1Q9UHI7 598 aa17.63■□□□□ 0.41
RBFOX1-219ENST00000569895 DNAH3Q8TD57 4116 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 RGS10O43665 173 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 MC5RP33032 325 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 AQP4P55087 323 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 CD69Q07108 199 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 C5orf64Q2M2E5 130 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 C9orf66Q5T8R8 295 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 ANKRD60Q9BZ19 345 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 IFI27L2Q9H2X8 130 aa17.62■□□□□ 0.41
RBFOX1-219ENST00000569895 DUSP21Q9H596 190 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms