RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 GPR146Q96CH1 333 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 COQ2Q96H96 371 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 SNX22Q96L94 193 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 LINC00052Q96N35 136 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 SLC25A31Q9H0C2 315 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 HIPK2Q9H2X6 1198 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 WFDC1Q9HC57 220 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 MSL2Q9HCI7 577 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ZC4H2Q9NQZ6 224 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 PARP11Q9NR21 331 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 MMP26Q9NRE1 261 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 COA4Q9NYJ1 87 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 TAS2R3Q9NYW6 316 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 OR1A1Q9P1Q5 309 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 FBXL17Q9UF56 701 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ZDHHC8Q9ULC8 765 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 GAB2Q9UQC2 676 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 RCL1Q9Y2P8 373 aaKnown RBP4.51□□□□□ -1.69
SF3B3-213ENST00000569687 RNF115Q9Y4L5 304 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 LSM5Q9Y4Y9 91 aaKnown RBP4.51□□□□□ -1.69
SF3B3-213ENST00000569687 A0A0G2JNJ9 132 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 TMEM218A2RU14 115 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 A6NLC8 198 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 B8ZZF3 427 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 FAM90A26D6RGX4 464 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 C16orf97H3BN30 126 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 C15orf65H3BRN8 121 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 K7N7A8 449 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 M0R1B8 84 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 ITGB1BP1O14713 200 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 MGST3O14880 152 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 WNT9BO14905 357 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 HSPA12AO43301 675 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 ADAM20O43506 726 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 CHST1O43916 411 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 IGKV1-39P01597 117 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 HBZP02008 142 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 IGKV1D-39P04432 117 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 ADH4P08319 380 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 C1QTNF9P0C862 333 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 DANCRP0C864 163 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 P0C879 139 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 CGB3P0DN86 165 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 CGB7P0DN87 165 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 SPP1P10451 314 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 PSG2P11465 335 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 PTAFRP25105 342 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 CD40P25942 277 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF83P51522 516 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 CAV2P51636 162 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 PAX9P55771 341 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 KLF3P57682 345 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 TAS2R30P59541 319 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 SELENOVP59797 346 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 SRSF2Q01130 221 aaKnown RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 EWSR1Q01844 656 aaKnown RBP eCLIP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 COL10A1Q03692 680 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 FAM27E3Q08E93 113 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 CXorf66Q5JRM2 361 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 PRAMEF6Q5VXH4 476 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 UNQ6494/PRO21346Q6UXR6 183 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 MEX3BQ6ZN04 569 aaKnown RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 LRP11Q86VZ4 500 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 FOXRED2Q8IWF2 684 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 SPAG16Q8N0X2 631 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 RPRMLQ8N4K4 120 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 COMMD1Q8N668 190 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 DRAM1Q8N682 238 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 TMEM252Q8N6L7 170 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 Q8NA96 180 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 BPIFCQ8NFQ6 507 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 OR1L1Q8NH94 360 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 Q8TCH9 128 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 LRRC29Q8WV35 223 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 IL1F10Q8WWZ1 152 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 BSCL2Q96G97 398 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 MEGF10Q96KG7 1140 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 RAB40CQ96S21 281 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 TSNAXQ99598 290 aaKnown RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 NARFLQ9H6Q4 476 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 ZMAT4Q9H898 229 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 LINC00574Q9H8X3 128 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 OR2S2Q9NQN1 319 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 LYRM2Q9NU23 88 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-213ENST00000569687 Q9UFV3 132 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 DUSP13Q9UII6 198 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 TP53TG5Q9Y2B4 290 aa4.5□□□□□ -1.69
SF3B3-213ENST00000569687 IGKV1D-17A0A075B6S4 117 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 TRAV39A0A0B4J263 110 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 A0A1B0GW64 132 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 FAM24AA6NFZ4 105 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ZSCAN5BA6NJL1 495 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF705EA8MWA4 302 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 UMAD1C9J7I0 102 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 TRIM77I1YAP6 450 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 F2RL2O00254 374 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 SPINT2O43291 252 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 YPEL1O60688 119 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ATG12O94817 140 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms