RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 AIREO43918 545 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 CA11O75493 328 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 GAPDHP04406 335 aaKnown RBP7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 GLAP06280 429 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 FAM106CPP0CH98 169 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 IL3RAP26951 378 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 CEACAM6P40199 344 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 KIR2DS4P43632 304 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 VDAC2P45880 294 aaPredicted RBP7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 PAX5Q02548 391 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 AANATQ16613 207 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 CCDC144NLQ6NUI1 221 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 SFXN4Q6P4A7 337 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 TRAT1Q6PIZ9 186 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 C10orf99Q6UWK7 81 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 GLDNQ6ZMI3 551 aaPredicted RBP7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 TGIF2LXQ8IUE1 241 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 FAM89BQ8N5H3 189 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 OR10A7Q8NGE5 316 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 OR52M1Q8NGK5 317 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 OR10R2Q8NGX6 335 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 ABHD14BQ96IU4 210 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 ABHD14AQ9BUJ0 271 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 PRSS22Q9GZN4 317 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 C16orf95Q9H693 158 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 LINC00574Q9H8X3 128 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 FBLN5Q9UBX5 448 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 KCNK7Q9Y2U2 307 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 MMP24Q9Y5R2 645 aa7.21□□□□□ -1.26
GTF3C1-210ENST00000569394 METTL21EPA6NDL7 271 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 FOXI3A8MTJ6 420 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 BET1O15155 118 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 NAPSAO96009 420 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 GSTT2P0CG29 244 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 GSTT2BP0CG30 244 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 CD28P10747 220 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 FGF9P31371 208 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 TALDO1P37837 337 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 RAB7AP51149 207 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 DYNLT3P51808 116 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 RPL15P61313 204 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 HLA-DRB3P79483 266 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 HMGN3Q15651 99 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 RPL39P5Q59GN2 51 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 KHDC1LQ5JSQ8 128 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 GAPTQ8N292 157 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 DRAXINQ8NBI3 349 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 OR2AK2Q8NG84 335 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 FAM110DQ8TAY7 271 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 RTN4IP1Q8WWV3 396 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 CFHR4Q92496 578 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 RBM14Q96PK6 669 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 ST6GALNAC5Q9BVH7 336 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 Q9N2K0 584 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 RAB9BQ9NP90 201 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 SERTAD4Q9NUC0 356 aa7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 MBNL3Q9NUK0 354 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-210ENST00000569394 SAA2-SAA4A0A096LPE2 208 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 MEIS3P1A6NDR6 274 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 TMEM235A6NFC5 223 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 RAB27BO00194 218 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 OR2F2O95006 317 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 TSPAN15O95858 294 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 AMY1AP04745 511 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 AMY2AP04746 511 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 SAA2P0DJI9 122 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 PTHLHP12272 177 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 HIST1H1DP16402 221 aaKnown RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 RPS19P39019 145 aaKnown RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 SERPINB10P48595 397 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 LINC00205P59089 165 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 VBP1P61758 197 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 NCS1P62166 190 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 CDNFQ49AH0 187 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 IGSF11Q5DX21 431 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 SLC16A12Q6ZSM3 486 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 SLC25A48Q6ZT89 311 aaKnown RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 CENPVQ7Z7K6 275 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 ZNF329Q86UD4 541 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 TPRA1Q86W33 373 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 SGMS2Q8NHU3 365 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 NUDCD2Q8WVJ2 157 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 YIPF6Q96EC8 236 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 AKR1E2Q96JD6 320 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 RITA1Q96K30 269 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 NOL4LQ96MY1 436 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 CITED1Q99966 193 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 MRPL20Q9BYC9 149 aaKnown RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 NAA50Q9GZZ1 169 aaKnown RBP7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 ZNF696Q9H7X3 374 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 C12orf4Q9NQ89 552 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 JPT1Q9UK76 154 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 HSF4Q9ULV5 492 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 MOB4Q9Y3A3 225 aa7.19□□□□□ -1.26
GTF3C1-210ENST00000569394 TET2Q6N021 2002 aaPredicted RBP7.18□□□□□ -1.26
GTF3C1-210ENST00000569394 TRAV18A0A075B6X5 111 aa7.18□□□□□ -1.26
GTF3C1-210ENST00000569394 IGKV1D-8A0A087WSZ0 117 aa7.18□□□□□ -1.26
GTF3C1-210ENST00000569394 IGKV1-6A0A0C4DH72 117 aa7.18□□□□□ -1.26
GTF3C1-210ENST00000569394 LINC01548A6NM66 108 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms