RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 PLGLAQ15195 96 aa8.8□□□□□ -1
CLK3-222ENST00000568232 ZNF691Q5VV52 312 aa8.8□□□□□ -1
CLK3-222ENST00000568232 LPCAT4Q643R3 524 aa8.8□□□□□ -1
CLK3-222ENST00000568232 ZFP1Q6P2D0 407 aa8.8□□□□□ -1
CLK3-222ENST00000568232 C5orf24Q7Z6I8 188 aa8.8□□□□□ -1
CLK3-222ENST00000568232 LAX1Q8IWV1 398 aa8.8□□□□□ -1
CLK3-222ENST00000568232 OR5T1Q8NG75 326 aa8.8□□□□□ -1
CLK3-222ENST00000568232 OR13C3Q8NGS6 347 aa8.8□□□□□ -1
CLK3-222ENST00000568232 OR2K2Q8NGT1 345 aa8.8□□□□□ -1
CLK3-222ENST00000568232 OR1L1Q8NH94 360 aa8.8□□□□□ -1
CLK3-222ENST00000568232 GGTLC1Q9BX51 225 aa8.8□□□□□ -1
CLK3-222ENST00000568232 PARP12Q9H0J9 701 aaKnown RBP8.8□□□□□ -1
CLK3-222ENST00000568232 ZNF556Q9HAH1 456 aa8.8□□□□□ -1
CLK3-222ENST00000568232 FRRS1LQ9P0K9 344 aa8.8□□□□□ -1
CLK3-222ENST00000568232 GNG8Q9UK08 70 aa8.8□□□□□ -1
CLK3-222ENST00000568232 DHDHQ9UQ10 334 aa8.8□□□□□ -1
CLK3-222ENST00000568232 MSGN1A6NI15 193 aa8.79□□□□□ -1
CLK3-222ENST00000568232 SULT1C4O75897 302 aa8.79□□□□□ -1
CLK3-222ENST00000568232 OR7C1O76099 320 aaPredicted RBP8.79□□□□□ -1
CLK3-222ENST00000568232 NDUFB8O95169 186 aa8.79□□□□□ -1
CLK3-222ENST00000568232 HTR3BO95264 441 aa8.79□□□□□ -1
CLK3-222ENST00000568232 MT-ND4P03905 459 aa8.79□□□□□ -1
CLK3-222ENST00000568232 EDN2P20800 178 aa8.79□□□□□ -1
CLK3-222ENST00000568232 OR3A3P47888 321 aa8.79□□□□□ -1
CLK3-222ENST00000568232 CRISP1P54107 249 aa8.79□□□□□ -1
CLK3-222ENST00000568232 NANOS3P60323 173 aaKnown RBP8.79□□□□□ -1
CLK3-222ENST00000568232 ADARB1P78563 741 aaKnown RBP8.79□□□□□ -1
CLK3-222ENST00000568232 GNMTQ14749 295 aa8.79□□□□□ -1
CLK3-222ENST00000568232 TATDN3Q17R31 274 aa8.79□□□□□ -1
CLK3-222ENST00000568232 FAM98BQ52LJ0 330 aaKnown RBP8.79□□□□□ -1
CLK3-222ENST00000568232 NXNL2Q5VZ03 156 aa8.79□□□□□ -1
CLK3-222ENST00000568232 OR2G2Q8NGZ5 317 aa8.79□□□□□ -1
CLK3-222ENST00000568232 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
CLK3-222ENST00000568232 WDR89Q96FK6 387 aaPredicted RBP8.79□□□□□ -1
CLK3-222ENST00000568232 PEF1Q9UBV8 284 aaKnown RBP8.79□□□□□ -1
CLK3-222ENST00000568232 LRRC42Q9Y546 428 aa8.79□□□□□ -1
CLK3-222ENST00000568232 LOC102724200A0A096LPH7 203 aaPredicted RBP8.78□□□□□ -1
CLK3-222ENST00000568232 AIPO00170 330 aa8.78□□□□□ -1
CLK3-222ENST00000568232 GABRPO00591 440 aa8.78□□□□□ -1
CLK3-222ENST00000568232 GEMIN2O14893 280 aaKnown RBP8.78□□□□□ -1
CLK3-222ENST00000568232 MAGEB3O15480 346 aa8.78□□□□□ -1
CLK3-222ENST00000568232 SPINT2O43291 252 aa8.78□□□□□ -1
CLK3-222ENST00000568232 HBZP02008 142 aa8.78□□□□□ -1
CLK3-222ENST00000568232 ISG15P05161 165 aa8.78□□□□□ -1
CLK3-222ENST00000568232 EFNB1P98172 346 aa8.78□□□□□ -1
CLK3-222ENST00000568232 PTGES3Q15185 160 aaKnown RBP8.78□□□□□ -1
CLK3-222ENST00000568232 RPEL1Q2QD12 228 aa8.78□□□□□ -1
CLK3-222ENST00000568232 DEFB114Q30KQ6 69 aa8.78□□□□□ -1
CLK3-222ENST00000568232 MOGAT2Q3SYC2 334 aa8.78□□□□□ -1
CLK3-222ENST00000568232 MORN2Q502X0 79 aa8.78□□□□□ -1
CLK3-222ENST00000568232 ATAD3CQ5T2N8 411 aa8.78□□□□□ -1
CLK3-222ENST00000568232 SYT6Q5T7P8 510 aaPredicted RBP8.78□□□□□ -1
CLK3-222ENST00000568232 FAM131AQ6UXB0 335 aa8.78□□□□□ -1
CLK3-222ENST00000568232 ZNF497Q6ZNH5 498 aa8.78□□□□□ -1
CLK3-222ENST00000568232 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
CLK3-222ENST00000568232 WFDC3Q8IUB2 231 aa8.78□□□□□ -1
CLK3-222ENST00000568232 POC5Q8NA72 575 aa8.78□□□□□ -1
CLK3-222ENST00000568232 PXT1Q8NFP0 134 aa8.78□□□□□ -1
CLK3-222ENST00000568232 OR10H4Q8NGA5 316 aa8.78□□□□□ -1
CLK3-222ENST00000568232 OR4K15Q8NH41 348 aa8.78□□□□□ -1
CLK3-222ENST00000568232 NEK7Q8TDX7 302 aa8.78□□□□□ -1
CLK3-222ENST00000568232 TNFAIP8L1Q8WVP5 186 aa8.78□□□□□ -1
CLK3-222ENST00000568232 IL4I1Q96RQ9 567 aa8.78□□□□□ -1
CLK3-222ENST00000568232 BATF3Q9NR55 127 aa8.78□□□□□ -1
CLK3-222ENST00000568232 ST3GAL6Q9Y274 331 aa8.78□□□□□ -1
CLK3-222ENST00000568232 A0A0G2JLM5 398 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 GNGT2O14610 69 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 XRCC3O43542 346 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 SPRY2O43597 315 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 OR2A4O95047 310 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 CDRT1O95170 752 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 CA2P00918 260 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 OR2T7P0C7T2 308 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 FASP25445 335 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 ZNF85Q03923 595 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 TRIM25Q14258 630 aaKnown RBP8.77□□□□□ -1.01
CLK3-222ENST00000568232 GK3PQ14409 553 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 RCN1Q15293 331 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 RSU1Q15404 277 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 STEAP3Q658P3 488 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 ZNF343Q6P1L6 599 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 ZNF833PQ6ZTB9 187 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 OR52L2PQ8NGH6 319 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 GRPEL2Q8TAA5 225 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 TMEM163Q8TC26 289 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 ABHD14AQ9BUJ0 271 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 FAM192AQ9GZU8 254 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 IFT22Q9H7X7 185 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 OR2S2Q9NQN1 319 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 PEMTQ9UBM1 199 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 TRAPPC2LQ9UL33 140 aa8.77□□□□□ -1.01
CLK3-222ENST00000568232 SAA2-SAA4A0A096LPE2 208 aa8.76□□□□□ -1.01
CLK3-222ENST00000568232 SULT1B1O43704 296 aa8.76□□□□□ -1.01
CLK3-222ENST00000568232 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
CLK3-222ENST00000568232 SAA2P0DJI9 122 aaPredicted RBP8.76□□□□□ -1.01
CLK3-222ENST00000568232 RAP2AP10114 183 aa8.76□□□□□ -1.01
CLK3-222ENST00000568232 ANXA8P13928 327 aa8.76□□□□□ -1.01
CLK3-222ENST00000568232 HOXB6P17509 224 aaKnown RBP8.76□□□□□ -1.01
CLK3-222ENST00000568232 RCC1P18754 421 aaPredicted RBP8.76□□□□□ -1.01
CLK3-222ENST00000568232 BMI1P35226 326 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms