RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC31A2O15432 143 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 LANCL1O43813 399 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 YPEL1O60688 119 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 ARL6IP5O75915 188 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 RGS11O94810 467 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 DUS4LO95620 317 aaKnown RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 HSMCR30P0CW71 290 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 ARSBP15848 533 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 CPEP16870 476 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 CRHBPP24387 322 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 PSMD7P51665 324 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 ZNF134P52741 427 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 QRFPP83859 136 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 MLLT11Q13015 90 aaPredicted RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 UNC119Q13432 240 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 HMGN3Q15651 99 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 CT45A1Q5HYN5 189 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 KHDC1LQ5JSQ8 128 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 NKAPLQ5M9Q1 402 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 OR10K2Q6IF99 312 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 FAM53AQ6NSI3 398 aaPredicted RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 FAM71F2Q6NXP2 309 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 C10orf99Q6UWK7 81 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 TMEM91Q6ZNR0 172 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 MOB1BQ7L9L4 216 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 OR2W3Q7Z3T1 314 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 C6orf201Q7Z4U5 140 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 ZNF329Q86UD4 541 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 STPG2Q8N412 459 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 FAM71E2Q8N5Q1 922 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 COMMD1Q8N668 190 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 Q8N9W7 124 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 OR51D1Q8NGF3 324 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 OR10V1Q8NGI7 309 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 CT45A3Q8NHU0 189 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 TMEM203Q969S6 136 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 PHF21AQ96BD5 680 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 GALMQ96C23 342 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 RCC1LQ96I51 464 aaKnown RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 NOL4LQ96MY1 436 aaPredicted RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 YPEL2Q96QA6 119 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 RASL11BQ9BPW5 248 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 SULT4A1Q9BR01 284 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 NICN1Q9BSH3 213 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 URM1Q9BTM9 101 aaKnown RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 ABHD14AQ9BUJ0 271 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 CCDC90BQ9GZT6 254 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 RIMS4Q9H426 269 aaPredicted RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 PLGRKTQ9HBL7 147 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 PLSCR3Q9NRY6 295 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 ZFP57Q9NU63 452 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 LIN7CQ9NUP9 197 aaKnown RBP3.78□□□□□ -1.8
CLK3-219ENST00000567805 NECAP2Q9NVZ3 263 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 ABRACLQ9P1F3 81 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 BLOC1S6Q9UL45 172 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 MGAT4AQ9UM21 535 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 hCG_2014768A0A024R1R8 64 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 A0A0A6YYD4 124 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 TRBV6-6A0A0A6YYG2 114 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 ZNF736B4DX44 427 aaPredicted RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 NAPSAO96009 420 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 SAA2P0DJI9 122 aaPredicted RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 IGLL1P15814 213 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 CALRP27797 417 aaKnown RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 BLVRBP30043 206 aaPredicted RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 SOX6P35712 828 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 PPP1CCP36873 323 aaKnown RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 GPR12P47775 334 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 F2RL1P55085 397 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 RPL23AP62750 156 aaKnown RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 RPS25P62851 125 aaKnown RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 FABP5Q01469 135 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 LSAMPQ13449 338 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 GNMTQ14749 295 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 P2RY14Q15391 338 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 TBCEQ15813 527 aaPredicted RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 RAB11BQ15907 218 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 FOXB2Q5VYV0 432 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 ZNF880Q6PDB4 577 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 TEX38Q6PEX7 206 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 IZUMO2Q6UXV1 221 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 ZNF833PQ6ZTB9 187 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 ZNF367Q7RTV3 350 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 ODF3L1Q8IXM7 274 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 FAM89BQ8N5H3 189 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 KLHL30-AS1Q8NEE0 82 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 OR2AK2Q8NG84 335 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 OR52L2PQ8NGH6 319 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 IL1F10Q8WWZ1 152 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 CYYR1Q96J86 154 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 CNBD2Q96M20 576 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 S1PR3Q99500 378 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 GFI1Q99684 422 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 MGLLQ99685 303 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 CHCHD6Q9BRQ6 235 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 FAAP24Q9BTP7 215 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 GPR61Q9BZJ8 451 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 LPAR5Q9H1C0 372 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms