RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 FAM215AQ9Y5M1 114 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 STRCQ7RTU9 1775 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 NAV2Q8IVL1 2488 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 SYNE1Q8NF91 8797 aaKnown RBP-0.06□□□□□ -2.42
CDH1-211ENST00000567320 GLI3P10071 1580 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 TRGV5A0A0B4J1U4 118 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 GRIFINA4D1Z8 144 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 NPPAP01160 153 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 RPSAP08865 295 aaKnown RBP-0.06□□□□□ -2.42
CDH1-211ENST00000567320 GALP22466 123 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 DAOAP59103 153 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 ACTBP60709 375 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 ACTG1P63261 375 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 LRRC75BQ2VPJ9 315 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 PIP5KL1Q5T9C9 394 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 TMEM42Q69YG0 159 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 ASCL4Q6XD76 172 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 OR4K17Q8NGC6 315 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 OR51L1Q8NGJ5 315 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 FNDC9Q8TBE3 224 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 CDKL2Q92772 493 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 SMR3AQ99954 134 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 SPRR2GQ9BYE4 73 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 BLZF1Q9H2G9 400 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 GOLPH3Q9H4A6 298 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 ANKHQ9HCJ1 492 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 TAS2R13Q9NYV9 303 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 COL4A5P29400 1685 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 NEURL4Q96JN8 1562 aa-0.06□□□□□ -2.42
CDH1-211ENST00000567320 NAV1Q8NEY1 1877 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 E9PCH4 1651 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 LAMA4Q16363 1823 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.07□□□□□ -2.42
CDH1-211ENST00000567320 MEIKINA0A087WXM9 373 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 A0A1W2PQD3 144 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 F8W036 122 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 BOLA2-SMG1P6H3BVE0 249 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 PHYHO14832 338 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 GMDSO60547 372 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 EPPINO95925 133 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 CCL3P10147 92 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 DEFA4P12838 97 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 ORM2P19652 201 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 CCR2P41597 374 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 XCL1P47992 114 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 CTBP2P56545 445 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 CLDN8P56748 225 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 SPAG1Q07617 926 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 HNRNPA1L2Q32P51 320 aaKnown RBP-0.07□□□□□ -2.42
CDH1-211ENST00000567320 ACTL10Q5JWF8 245 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 TMEM31Q5JXX7 168 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 LAMTOR1Q6IAA8 161 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 OR10K2Q6IF99 312 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 DRAM2Q6UX65 266 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 C7orf65Q6ZTY9 151 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 RPS19BP1Q86WX3 136 aaKnown RBP-0.07□□□□□ -2.42
CDH1-211ENST00000567320 DYNAPQ8N1N2 210 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 SPICQ8N5J4 248 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 OR51T1Q8NGJ9 327 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 ANGPTL6Q8NI99 470 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 KIAA1143Q96AT1 154 aaPredicted RBP-0.07□□□□□ -2.42
CDH1-211ENST00000567320 PGLYRP3Q96LB9 341 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 MED18Q9BUE0 208 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 NSD2O96028 1365 aa-0.07□□□□□ -2.42
CDH1-211ENST00000567320 MYO5BQ9ULV0 1848 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 IGHV3-64A0A075B6Q5 118 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 LINC00862A6NCI5 91 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 OR11H12B2RN74 326 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 GEMIN2O14893 280 aaKnown RBP-0.08□□□□□ -2.42
CDH1-211ENST00000567320 SCN2BO60939 215 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 CIAO1O76071 339 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 IGHV1-69P01742 117 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 GIMD1P0DJR0 217 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 CRYBB3P26998 211 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 FAM3AP98173 230 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 MOGQ16653 247 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 HENMT1Q5T8I9 393 aaKnown RBP-0.08□□□□□ -2.42
CDH1-211ENST00000567320 HBMQ6B0K9 141 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 SPATA8Q6RVD6 105 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 SLC36A1Q7Z2H8 476 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 CNEP1R1Q8N9A8 125 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 OR4A15Q8NGL6 344 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 OR11H2Q8NH07 326 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 RNASE6Q93091 150 aaKnown RBP-0.08□□□□□ -2.42
CDH1-211ENST00000567320 TOP1MTQ969P6 601 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 TRNT1Q96Q11 434 aaKnown RBP-0.08□□□□□ -2.42
CDH1-211ENST00000567320 ACBD6Q9BR61 282 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 COPS4Q9BT78 406 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 GTSF1LQ9H1H1 148 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 NRBP2Q9NSY0 501 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 VAPAQ9P0L0 249 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 GLS2Q9UI32 602 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 CPAMD8Q8IZJ3 1885 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 TECTAO75443 2155 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 KIF24Q5T7B8 1368 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 RAB3GAP2Q9H2M9 1393 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 POLEQ07864 2286 aa-0.08□□□□□ -2.42
CDH1-211ENST00000567320 SMARCA4P51532 1647 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 PHRF1Q9P1Y6 1649 aaKnown RBP-0.09□□□□□ -2.42
CDH1-211ENST00000567320 AQRO60306 1485 aaKnown RBP eCLIP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms