RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ACTBP60709 375 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 C6orf141Q5SZD1 244 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 LIN54Q6MZP7 749 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 FAM71F2Q6NXP2 309 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 NPBQ8NG41 125 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 OR52L2PQ8NGH6 319 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 NEDD4LQ96PU5 975 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 ERGIC3Q9Y282 383 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 NBR2O15453 112 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 SLC2A2P11168 524 aaPredicted RBP11.67□□□□□ -0.54
RNF40-209ENST00000566703 ZNF616Q08AN1 781 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 GNMTQ14749 295 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 C5orf64Q2M2E5 130 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 ZNF260Q3ZCT1 412 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 NANOGP1Q8N7R0 232 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 PRR25Q96S07 402 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 MRPL20Q9BYC9 149 aaKnown RBP11.67□□□□□ -0.54
RNF40-209ENST00000566703 KLK15Q9H2R5 256 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 GHITMQ9H3K2 345 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 ABRACLQ9P1F3 81 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 ZNF256Q9Y2P7 627 aaPredicted RBP11.67□□□□□ -0.54
RNF40-209ENST00000566703 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
RNF40-209ENST00000566703 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 TRAV41A0A0B4J266 112 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 PNMA8CA0A1B0GUJ8 204 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 NDUFA3O95167 84 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 MYF6P23409 242 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 CHATP28329 748 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 PPP1CCP36873 323 aaKnown RBP11.66□□□□□ -0.54
RNF40-209ENST00000566703 RAB9AP51151 201 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 HMGN3Q15651 99 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 LRRC36Q1X8D7 754 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 NKAPLQ5M9Q1 402 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 C1orf100Q5SVJ3 147 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 ZNF660Q6AZW8 331 aaPredicted RBP11.66□□□□□ -0.54
RNF40-209ENST00000566703 ZNF429Q86V71 674 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 MS4A15Q8N5U1 240 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 MINDY2Q8NBR6 621 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 FBLIM1Q8WUP2 373 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 RITA1Q96K30 269 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 ANKRD60Q9BZ19 345 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 PIPOXQ9P0Z9 390 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 KIAA1456Q9P272 454 aa11.66□□□□□ -0.54
RNF40-209ENST00000566703 G3V318 75 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 MYL12BO14950 172 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 CD37P11049 281 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 MC5RP33032 325 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 CRIP2P52943 208 aaPredicted RBP11.65□□□□□ -0.54
RNF40-209ENST00000566703 ACSM3Q53FZ2 586 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 GLT8D1Q68CQ7 371 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 LAIR2Q6ISS4 152 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 C8orf59Q8N0T1 100 aaPredicted RBP11.65□□□□□ -0.54
RNF40-209ENST00000566703 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 OR2AK2Q8NG84 335 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 KCNG3Q8TAE7 436 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 PHYHIPQ92561 330 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 FAM46BQ96A09 425 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 RBMXL1Q96E39 390 aaKnown RBP11.65□□□□□ -0.54
RNF40-209ENST00000566703 TM2D1Q9BX74 207 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 RIMS4Q9H426 269 aaPredicted RBP11.65□□□□□ -0.54
RNF40-209ENST00000566703 GNB4Q9HAV0 340 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 STEAP1Q9UHE8 339 aa11.65□□□□□ -0.54
RNF40-209ENST00000566703 RAB29O14966 203 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 CNTFRP26992 372 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 BLVRBP30043 206 aaPredicted RBP11.64□□□□□ -0.55
RNF40-209ENST00000566703 RPS27AP62979 156 aaKnown RBP11.64□□□□□ -0.55
RNF40-209ENST00000566703 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 RNLSQ5VYX0 342 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 C5orf24Q7Z6I8 188 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 RNF5Q99942 180 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 SULT4A1Q9BR01 284 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 FAAP24Q9BTP7 215 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 IFI27L2Q9H2X8 130 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 FKBP14Q9NWM8 211 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 SMAD5-AS1Q9Y6J3 95 aa11.64□□□□□ -0.55
RNF40-209ENST00000566703 SAA2-SAA4A0A096LPE2 208 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 OR5H14A6NHG9 310 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 RRHO14718 337 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 OVOL1O14753 267 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 NAPSAO96009 420 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 SAA2P0DJI9 122 aaPredicted RBP11.63□□□□□ -0.55
RNF40-209ENST00000566703 OR3A3P47888 321 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 TMEM267Q0VDI3 215 aaPredicted RBP11.63□□□□□ -0.55
RNF40-209ENST00000566703 C19orf54Q5BKX5 351 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 FAM27D1Q5T7N8 215 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 AHSA2Q719I0 299 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 DCUN1D4Q92564 292 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 TMEM59Q9BXS4 323 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 SLC23A1Q9UHI7 598 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 RNF150Q9ULK6 438 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 NUBP2Q9Y5Y2 271 aa11.63□□□□□ -0.55
RNF40-209ENST00000566703 TRBV6-6A0A0A6YYG2 114 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms