RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TMEM65Q6PI78 240 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 LYPD2Q6UXB3 125 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 HEPN1Q6WQI6 88 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 BVESQ8NE79 360 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 OR13A1Q8NGR1 328 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 CLDND2Q8NHS1 167 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 MAFIPQ8WZ33 124 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 DACT3Q96B18 629 aaPredicted RBP8.13□□□□□ -1.11
SF3B3-207ENST00000566095 NMES1Q9C002 83 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 RANGRFQ9HD47 186 aaPredicted RBP8.13□□□□□ -1.11
SF3B3-207ENST00000566095 OR2S2Q9NQN1 319 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 MGAT4CQ9UBM8 478 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 CTSZQ9UBR2 303 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 CACFD1Q9UGQ2 172 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 RPUSD1Q9UJJ7 312 aaKnown RBP8.13□□□□□ -1.11
SF3B3-207ENST00000566095 ITGB1BP2Q9UKP3 347 aa8.13□□□□□ -1.11
SF3B3-207ENST00000566095 RNF212BA8MTL3 300 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 VWC2LB2RUY7 222 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 YPEL1O60688 119 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 SCTP09683 121 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 CGB3P0DN86 165 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 CGB7P0DN87 165 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 SLC25A6P12236 298 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 SELLP14151 372 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 RPA2P15927 270 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 IL3RAP26951 378 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 CEACAM6P40199 344 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 ERVFRD-1P60508 538 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 Q5PR19 223 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 TMEM200BQ69YZ2 307 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 Q6ZPA2 131 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 C1orf122Q6ZSJ8 110 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 TMED4Q7Z7H5 227 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 C8orf31Q8N9H6 132 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 RTN4IP1Q8WWV3 396 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-207ENST00000566095 TNFRSF14Q92956 283 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 TMEM230Q96A57 120 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 ABHD14BQ96IU4 210 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 YPEL2Q96QA6 119 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 SEC22CQ9BRL7 303 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 GON7Q9BXV9 100 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 LIME1Q9H400 295 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 NARFLQ9H6Q4 476 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 SLC2A9Q9NRM0 540 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
SF3B3-207ENST00000566095 B4DSR2 109 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 PET100P0DJ07 73 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 SLC25A4P12235 298 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 CXCL3P19876 107 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 GNRHRP30968 328 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 RBMXP38159 391 aaKnown RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 ARHGDIBP52566 201 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 PRRX1P54821 245 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 PIGPP57054 158 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 SUPT4H1P63272 117 aaKnown RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 HOXA4Q00056 320 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 CD83Q01151 205 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 HERPUD1Q15011 391 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 NCR3LG1Q68D85 454 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF841Q6ZN19 808 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 LGI3Q8N145 548 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 TEX29Q8N6K0 151 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 OR10V1Q8NGI7 309 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 OR13D1Q8NGV5 346 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 TMEM56Q96MV1 263 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 FYTTD1Q96QD9 318 aaKnown RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 FOXC2Q99958 501 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 NAA60Q9H7X0 242 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 METTL8Q9H825 291 aaKnown RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 HEXA-AS1Q9H8Q6 139 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 C19orf12Q9NSK7 152 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 PIPOXQ9P0Z9 390 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 ONECUT1Q9UBC0 465 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 POLR3KQ9Y2Y1 108 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 AMMECR1Q9Y4X0 333 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-207ENST00000566095 KPTNQ9Y664 436 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 SESN1Q9Y6P5 492 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 TMEM56-RWDD3S4R434 201 aa8.11□□□□□ -1.11
SF3B3-207ENST00000566095 ARID1AO14497 2285 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 TRAV20A0A0B4J274 112 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 IGKV1-6A0A0C4DH72 117 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 TEX13DA0A0J9YY54 714 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-207ENST00000566095 A0A1B0GW55 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 H0Y980 276 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 C15orf65H3BRN8 121 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 BOLA2-SMG1P6H3BVE0 249 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 TOR1AO14656 332 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 MPPED1O15442 326 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 ATG12O94817 140 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 CDS2O95674 445 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 IFNA21P01568 189 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 TFF1P04155 84 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4L2P0CJ85 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4L3P0CJ86 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4L4P0CJ87 422 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 432.6 ms