RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PSG11Q9UQ72 335 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 AMMECR1Q9Y4X0 333 aaPredicted RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 IGHV2-26A0A0B4J1V2 119 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 J3QR06 171 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 SLC22A5O76082 557 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 PPYP01298 95 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 IGHV3-7P01780 117 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 OR8U9P0C7N5 309 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 HOXB4P17483 251 aaPredicted RBP6.36□□□□□ -1.39
CDH1-208ENST00000565810 HNF1AP20823 631 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 CD34P28906 385 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 ECI1P42126 302 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 LUMP51884 338 aaPredicted RBP6.36□□□□□ -1.39
CDH1-208ENST00000565810 UBE2E1P51965 193 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 FXYD4P59646 89 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 BPIFB3P59826 476 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 GNMTQ14749 295 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 SCGB2B2Q4G0G5 96 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 MZT2BQ6NZ67 158 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 LPCAT3Q6P1A2 487 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 CLEC9AQ6UXN8 241 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 PDZD9Q8IXQ8 264 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 H1FOOQ8IZA3 346 aaPredicted RBP6.36□□□□□ -1.39
CDH1-208ENST00000565810 LINC00311Q8N616 119 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 C8orf31Q8N9H6 132 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 BEND2Q8NDZ0 799 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 OR11H6Q8NGC7 330 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 OR4C16Q8NGL9 310 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 OR8U1Q8NH10 309 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 LEAP2Q969E1 77 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 SCGB3A2Q96PL1 93 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 C11orf54Q9H0W9 315 aaPredicted RBP6.36□□□□□ -1.39
CDH1-208ENST00000565810 MMP28Q9H239 520 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 PIPOXQ9P0Z9 390 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 ZNF221Q9UK13 617 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 OR2W1Q9Y3N9 320 aa6.36□□□□□ -1.39
CDH1-208ENST00000565810 ANK3Q12955 4377 aaKnown RBP6.36□□□□□ -1.39
CDH1-208ENST00000565810 TRAV40A0A0B4J280 105 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 IGHV1-69DA0A0B4J2H0 117 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 CENPVL3A0A0U1RRI6 287 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 A0A1W2PPE3 182 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 A0A1W2PRD5 423 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 A0A1W2PRF3 423 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 A0A1W2PRM7 423 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 CYSRT1A8MQ03 144 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 LEUTXA8MZ59 168 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 RNASEK-C17orf49H0YIS7 233 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 RAB29O14966 203 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 ST8SIA5O15466 376 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 LYRM1O43325 122 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 TUSC2O75896 110 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 IGHV1-69P01742 117 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 PGAM2P15259 253 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 EPHA1P21709 976 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 AADACP22760 399 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 HTR1DP28221 377 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 S100GP29377 79 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 SRP14P37108 136 aaKnown RBP6.35□□□□□ -1.39
CDH1-208ENST00000565810 CEACAM3P40198 252 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 GPR12P47775 334 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 DLX1P56177 255 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 PRB3Q04118 309 aaPredicted RBP6.35□□□□□ -1.39
CDH1-208ENST00000565810 KLRD1Q13241 179 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 DCTN2Q13561 401 aaKnown RBP6.35□□□□□ -1.39
CDH1-208ENST00000565810 CT45A1Q5HYN5 189 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 MINOS1Q5TGZ0 78 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 ZNF626Q68DY1 528 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 FAAP20Q6NZ36 180 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 IDO2Q6ZQW0 420 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 SLC25A48Q6ZT89 311 aaKnown RBP6.35□□□□□ -1.39
CDH1-208ENST00000565810 LYG1Q8N1E2 194 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 OR4D10Q8NGI6 311 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 OR51S1Q8NGJ8 323 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 OR56B4Q8NH76 319 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 TERB2Q8NHR7 220 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 CT45A3Q8NHU0 189 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 S1PR3Q99500 378 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 SLC6A7Q99884 636 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 MS4A7Q9GZW8 240 aaPredicted RBP6.35□□□□□ -1.39
CDH1-208ENST00000565810 PALMDQ9NP74 551 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 DPM3Q9P2X0 92 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 NUP50Q9UKX7 468 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 RNF150Q9ULK6 438 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 TBL2Q9Y4P3 447 aaKnown RBP6.35□□□□□ -1.39
CDH1-208ENST00000565810 MINOS1-NBL1R4GNA1 71 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 MED13LQ71F56 2210 aa6.35□□□□□ -1.39
CDH1-208ENST00000565810 IGHV3OR16-10A0A075B7F0 116 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 FAM240BA0A1B0GVZ2 78 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 BUB1B-PAK6H3BSN5 160 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 NPFFO15130 113 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 SLC31A2O15432 143 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 LY6G6DO95868 133 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 AVPP01185 164 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 IGLV1-47P01700 117 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 ZNF735P0CB33 412 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 ARHGDIBP52566 201 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 ZNF134P52741 427 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 UCP3P55916 312 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 SCGB2A2Q13296 93 aa6.34□□□□□ -1.39
CDH1-208ENST00000565810 ASAH1Q13510 395 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms