RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ASB7Q9H672 318 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 C12orf4Q9NQ89 552 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 SDHAF3Q9NRP4 125 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 TMEM106BQ9NUM4 274 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 VAPAQ9P0L0 249 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 CLEC2DQ9UHP7 191 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 PIEZO1Q92508 2521 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 TMEM131Q92545 1883 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 BRWD1Q9NSI6 2320 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 SPTBN2O15020 2390 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 CACNA1GO43497 2377 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 A0A1B0GUL6 1792 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 SPTBN4Q9H254 2564 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 IGHV3-21A0A0B4J1V1 117 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 A0A1B0GU33 70 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 LOC730098B7Z3J9 87 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 I3L4J1 428 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 SLC31A1O15431 190 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 GATCO43716 136 aaKnown RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 SLC37A4O43826 429 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 CRABP2P29373 138 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 DNASE1L1P49184 302 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 VSNL1P62760 191 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 STX3Q13277 289 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 ANGPT1Q15389 498 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 GUSBP1Q15486 140 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 VAMP3Q15836 100 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 TTMPQ5BVD1 217 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 CLLU1OSQ5K130 101 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 IDNKQ5T6J7 187 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 DRAXINQ8NBI3 349 aaPredicted RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 OR8A1Q8NGG7 326 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 LGALS14Q8TCE9 139 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 BLNKQ8WV28 456 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 APOBEC3DQ96AK3 386 aaPredicted RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 CCDC124Q96CT7 223 aaKnown RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 CPB2Q96IY4 423 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 QKIQ96PU8 341 aaKnown RBP eCLIP1.42□□□□□ -2.18
PALB2-203ENST00000565038 APOL4Q9BPW4 351 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 ANAPC13Q9BS18 74 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 SPZ1Q9BXG8 430 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 UPF3BQ9BZI7 483 aaKnown RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 ULBP1Q9BZM6 244 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 POMKQ9H5K3 350 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 IFT46Q9NQC8 304 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 NRBP2Q9NSY0 501 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 DNAJC27Q9NZQ0 273 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 CHMP5Q9NZZ3 219 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 NXT1Q9UKK6 140 aaKnown RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 DDX60LQ5H9U9 1706 aaKnown RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 ARAP2Q8WZ64 1704 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 PLIN4Q96Q06 1357 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 COL11A1P12107 1806 aaPredicted RBP1.42□□□□□ -2.18
PALB2-203ENST00000565038 WDFY3Q8IZQ1 3526 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 MYH3P11055 1940 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 COL4A6Q14031 1691 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 SORL1Q92673 2214 aa1.42□□□□□ -2.18
PALB2-203ENST00000565038 NRCAMQ92823 1304 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 RAD50Q92878 1312 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 NCOR2Q9Y618 2525 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 CACNA1HO95180 2353 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 ZDBF2Q9HCK1 2354 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 ECM29Q5VYK3 1845 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 IGHV3-43A0A0B4J1X8 118 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 LOC389332A0A1B0GUA5 103 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 ERICH2A1L162 156 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 RBFOX3A6NFN3 312 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 FAM25EA8MYX2 175 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 ZNF879B4DU55 563 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 C5orf67F2Z3F1 127 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 F5H5P2 479 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 H3BMM0 161 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 ZNF593O00488 134 aaPredicted RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 VAPBO95292 243 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 IVLP07476 585 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 MLNP12872 115 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 CCL2P13500 99 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 GZMHP20718 246 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 S100A2P29034 98 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 IMPA1P29218 277 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 IL12BP29460 328 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 P2RY2P41231 377 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 HADHBP55084 474 aaKnown RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 BNIP2Q12982 314 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 TMED1Q13445 227 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 TRIP13Q15645 432 aaPredicted RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 C18orf21Q32NC0 220 aaPredicted RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 ACTL10Q5JWF8 245 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 UBE2NLQ5JXB2 153 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 LINC00596Q86U02 117 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 CYP4Z1Q86W10 505 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 C10orf107Q8IVU9 208 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 BLIDQ8IZY5 108 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 SYCE1Q8N0S2 351 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 SPERTQ8NA61 448 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 OR10D4PQ8NGN7 298 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 OR6K3Q8NGY3 331 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 NELFBQ8WX92 580 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 RAD51AP1Q96B01 352 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms