RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 REG1BP48304 166 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 ZNF134P52741 427 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 EBI3Q14213 229 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 ABCA11PQ4W5N1 156 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 IZUMO1Q8IYV9 350 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 LYG1Q8N1E2 194 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 TSPAN14Q8NG11 270 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 OR2AK2Q8NG84 335 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 OR10R2Q8NGX6 335 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 CENPOQ9BU64 300 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 WNT10AQ9GZT5 417 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 OR51E2Q9H255 320 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 MMP27Q9H306 513 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 GHITMQ9H3K2 345 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 SLC31A2O15432 143 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 FBXO24O75426 580 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 SCGNO76038 276 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 ZBTB25P24278 435 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 HLA-DRB3P79483 266 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 GNMTQ14749 295 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 PLAC9Q5JTB6 97 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 FAM53AQ6NSI3 398 aaPredicted RBP10.68□□□□□ -0.7
CLK3-216ENST00000564468 OR8H1Q8NGG4 311 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 EDARADDQ8WWZ3 215 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 CHCHD6Q9BRQ6 235 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 Q9N2K0 584 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
CLK3-216ENST00000564468 VWFP04275 2813 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 LOC100506127A0A0U1RQW1 187 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 SERPINE3A8MV23 424 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 HSPA12AO43301 675 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 TMEM127O75204 238 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 MOSP00540 346 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 CSF1P09603 554 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 SDC2P34741 201 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 SCAND1P57086 179 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 HNF4GQ14541 408 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 C9orf152Q5JTZ5 239 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 FAM71F2Q6NXP2 309 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 CENPVQ7Z7K6 275 aaPredicted RBP10.67□□□□□ -0.7
CLK3-216ENST00000564468 EAF1Q96JC9 268 aaPredicted RBP10.67□□□□□ -0.7
CLK3-216ENST00000564468 S1PR3Q99500 378 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 HDHD3Q9BSH5 251 aaPredicted RBP10.67□□□□□ -0.7
CLK3-216ENST00000564468 ATG5Q9H1Y0 275 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 SLC23A1Q9UHI7 598 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 DAPK2Q9UIK4 370 aa10.67□□□□□ -0.7
CLK3-216ENST00000564468 NOTCH1P46531 2555 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 IGHV3-72A0A0B4J1Y9 119 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 TRDCB7Z8K6 153 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 RAB27BO00194 218 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 RAB29O14966 203 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 AMY1AP04745 511 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 AMY2AP04746 511 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 SLC2A2P11168 524 aaPredicted RBP10.66□□□□□ -0.7
CLK3-216ENST00000564468 HIST1H1DP16402 221 aaKnown RBP10.66□□□□□ -0.7
CLK3-216ENST00000564468 TALDO1P37837 337 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 SERPINB10P48595 397 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 KIR2DS1Q14954 304 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 SFXN4Q6P4A7 337 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 Q6ZS46 218 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 NR2C2APQ86WQ0 139 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 CYYR1Q96J86 154 aa10.66□□□□□ -0.7
CLK3-216ENST00000564468 A0A0B4J203 849 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 SMIM30A4D0T7 59 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 NCBP2LA6PVI3 153 aaKnown RBP10.65□□□□□ -0.7
CLK3-216ENST00000564468 MFNGO00587 321 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 DIRAS3O95661 229 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 GNB3P16520 340 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 CEACAM6P40199 344 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 PLA2G7Q13093 441 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 LSAMPQ13449 338 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 ARFRP1Q13795 201 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 SRSF7Q16629 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLK3-216ENST00000564468 MOGAT2Q3SYC2 334 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 C5orf24Q7Z6I8 188 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 CROCCP3Q8IVE0 287 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 Q8N6K4 173 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 OR5AU1Q8NGC0 362 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 OR4A4PQ8NGN8 299 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 PHF21AQ96BD5 680 aa10.65□□□□□ -0.7
CLK3-216ENST00000564468 A0A075B6Q4 140 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 AIREO43918 545 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 OPN1MWP04001 364 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 FCGR3AP08637 254 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 SCTP09683 121 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 OPN1MW2P0DN77 364 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 OPN1MW3P0DN78 364 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 PITPNAQ00169 270 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 MXD1Q05195 221 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 Q6ZPA2 131 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 ZNF833PQ6ZTB9 187 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 FOXRED2Q8IWF2 684 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 ODF3L1Q8IXM7 274 aa10.64□□□□□ -0.71
CLK3-216ENST00000564468 OR4X2Q8NGF9 303 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms