RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 LPAR2Q9HBW0 351 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 LRBAP50851 2863 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 A0A087X0M5 115 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 A0A096LNT2 108 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 A0A1B0GX30 115 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 INMT-MINDY4F8WBC2 141 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 GPR31O00270 319 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 PRAF2O60831 178 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.73
CLK3-214ENST00000564096 GZMKP49863 264 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 GNG10P50151 68 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 DVL1P1P54792 670 aaPredicted RBP10.52□□□□□ -0.73
CLK3-214ENST00000564096 UBE2MP61081 183 aaKnown RBP10.52□□□□□ -0.73
CLK3-214ENST00000564096 BAMBIQ13145 260 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 MORN2Q502X0 79 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 GLCCI1Q86VQ1 547 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 KRTAP1-3Q8IUG1 177 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 ZNF645Q8N7E2 425 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 C8orf31Q8N9H6 132 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 OR9G1Q8NH87 305 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 DACT3Q96B18 629 aaPredicted RBP10.52□□□□□ -0.73
CLK3-214ENST00000564096 C1orf159Q96HA4 380 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 AKR1E2Q96JD6 320 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 CLEC7AQ9BXN2 247 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 OR2D2Q9H210 308 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 GHITMQ9H3K2 345 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 HEXA-AS1Q9H8Q6 139 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 ZNF221Q9UK13 617 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 PSG11Q9UQ72 335 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
CLK3-214ENST00000564096 SPG11Q96JI7 2443 aa10.52□□□□□ -0.73
CLK3-214ENST00000564096 RNF212BA8MTL3 300 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 TOR1AO14656 332 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 ST8SIA5O15466 376 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 OR8U9P0C7N5 309 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 CD34P28906 385 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 GPR12P47775 334 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 ARF6P62330 175 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 PAX2Q02962 417 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 DCAF12L2Q5VW00 463 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 FAHD2BQ6P2I3 314 aaPredicted RBP10.51□□□□□ -0.73
CLK3-214ENST00000564096 C5orf24Q7Z6I8 188 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.51□□□□□ -0.73
CLK3-214ENST00000564096 ZBTB34Q8NCN2 500 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 OR10X1Q8NGY0 326 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 OR8U1Q8NH10 309 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 ZNF596Q8TC21 504 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 FAHD2AQ96GK7 314 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 GPN1Q9HCN4 374 aaPredicted RBP10.51□□□□□ -0.73
CLK3-214ENST00000564096 PIPOXQ9P0Z9 390 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 VSIG4Q9Y279 399 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 INSIG2Q9Y5U4 225 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 UNC79Q9P2D8 2635 aa10.51□□□□□ -0.73
CLK3-214ENST00000564096 IGHV2-26A0A0B4J1V2 119 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 IGKV1D-13A0A0B4J2D9 117 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 HSD17B6O14756 317 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 MMP23AO75900 390 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 TOX4O94842 621 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 IGKV1-13P0DP09 117 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 ANXA3P12429 323 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 SPNP16150 400 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 PRTN3P24158 256 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 COX7A1P24310 79 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 PRRX1P54821 245 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 TMEM249Q2WGJ8 235 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
CLK3-214ENST00000564096 VMO1Q7Z5L0 202 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 ABHD12Q8N2K0 398 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 WFDC11Q8NEX6 87 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 TMEM186Q96B77 213 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 RSRP1Q9BUV0 290 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 IFI27L2Q9H2X8 130 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 UNKLQ9H9P5 680 aaKnown RBP10.5□□□□□ -0.73
CLK3-214ENST00000564096 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 SLC2A9Q9NRM0 540 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 GPR132Q9UNW8 380 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 ABCA12Q86UK0 2595 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 ARID1AO14497 2285 aa10.5□□□□□ -0.73
CLK3-214ENST00000564096 ANKRD17O75179 2603 aaKnown RBP10.5□□□□□ -0.73
CLK3-214ENST00000564096 TEX13DA0A0J9YY54 714 aaPredicted RBP10.49□□□□□ -0.73
CLK3-214ENST00000564096 J3QLI3 93 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 RAB29O14966 203 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 MECP2P51608 486 aaKnown RBP10.49□□□□□ -0.73
CLK3-214ENST00000564096 PIGPP57054 158 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 RAB25P57735 213 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 RND3P61587 244 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 CATR1Q13166 79 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 TATDN3Q17R31 274 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 TMEM128Q5BJH2 165 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 FAM71F2Q6NXP2 309 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 ZNF818PQ6ZRF7 136 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 SGPP2Q8IWX5 399 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 LYG1Q8N1E2 194 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 LINC00311Q8N616 119 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 BEND2Q8NDZ0 799 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms