RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZNF695Q8IW36 515 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 OR8H1Q8NGG4 311 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 OR6M1Q8NGM8 313 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 DPF1Q92782 380 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 SLC22A1O15245 554 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 VDAC1P21796 283 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 BLVRBP30043 206 aaPredicted RBP13.9□□□□□ -0.18
NME3-205ENST00000563854 OR3A3P47888 321 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 HTD2P86397 168 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 IRF3Q14653 427 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 HMGN3Q15651 99 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 CXorf66Q5JRM2 361 aaPredicted RBP13.9□□□□□ -0.18
NME3-205ENST00000563854 STEAP3Q658P3 488 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 ZNF554Q86TJ5 538 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 FAM71E2Q8N5Q1 922 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 OR2AK2Q8NG84 335 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 GON7Q9BXV9 100 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 PLEKHJ1Q9NW61 149 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 STEAP1Q9UHE8 339 aa13.9□□□□□ -0.18
NME3-205ENST00000563854 ZNF107Q9UII5 783 aaPredicted RBP13.9□□□□□ -0.18
NME3-205ENST00000563854 A0A0A6YYD4 124 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 TMEM14DPA8MWL7 114 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 YPEL1O60688 119 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 BPNT1O95861 308 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 MYCNOSP40205 109 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 KRTAP10-11P60412 298 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 ODF3L1Q8IXM7 274 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 SVOPQ8N4V2 548 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 YPEL2Q96QA6 119 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 TM2D1Q9BX74 207 aa13.89□□□□□ -0.19
NME3-205ENST00000563854 AK6Q9Y3D8 172 aaKnown RBP13.89□□□□□ -0.19
NME3-205ENST00000563854 SAA2-SAA4A0A096LPE2 208 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 K7EIL1 84 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 ST8SIA5O15466 376 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 SAA2P0DJI9 122 aaPredicted RBP13.88□□□□□ -0.19
NME3-205ENST00000563854 ARSBP15848 533 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 CNTFRP26992 372 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 MAP2K4P45985 399 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 ACTBP60709 375 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 DEFB121Q5J5C9 76 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 TMEM91Q6ZNR0 172 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 NABP2Q9BQ15 211 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 ZNF251Q9BRH9 671 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
NME3-205ENST00000563854 URM1Q9BTM9 101 aaKnown RBP13.88□□□□□ -0.19
NME3-205ENST00000563854 GPR61Q9BZJ8 451 aa13.88□□□□□ -0.19
NME3-205ENST00000563854 WI2-2373I1.2A0A1W2PRP0 233 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 CCL24O00175 119 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 SOCS1O15524 211 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 ARL6IP5O75915 188 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
NME3-205ENST00000563854 SLC6A1P30531 599 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 CLDN12P56749 244 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 QRFPP83859 136 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 FOXE3Q13461 319 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 RAB11BQ15907 218 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 RAX2Q96IS3 184 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 P2RX4Q99571 388 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 GFI1Q99684 422 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 ANKRD60Q9BZ19 345 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 LPAR5Q9H1C0 372 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 DUSP21Q9H596 190 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 PARP11Q9NR21 331 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 AK3Q9UIJ7 227 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 LRRC42Q9Y546 428 aa13.87□□□□□ -0.19
NME3-205ENST00000563854 DNAH3Q8TD57 4116 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 SLC17A2O00624 439 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 MLLT11Q13015 90 aaPredicted RBP13.86□□□□□ -0.19
NME3-205ENST00000563854 TPBGQ13641 420 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 TRAM1Q15629 374 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 IZUMO2Q6UXV1 221 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 ZNF833PQ6ZTB9 187 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 MOB1BQ7L9L4 216 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 RITA1Q96K30 269 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 CNBD2Q96M20 576 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 KCTD7Q96MP8 289 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 MCRIP2Q9BUT9 160 aaKnown RBP13.86□□□□□ -0.19
NME3-205ENST00000563854 PARP12Q9H0J9 701 aaKnown RBP13.86□□□□□ -0.19
NME3-205ENST00000563854 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 SLC23A1Q9UHI7 598 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 WSB1Q9Y6I7 421 aa13.86□□□□□ -0.19
NME3-205ENST00000563854 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 NBR2O15453 112 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 HSPA12AO43301 675 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 NAPSAO96009 420 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 ELANEP08246 267 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 CPEP16870 476 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 CRHBPP24387 322 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 PSMA1P25786 263 aaKnown RBP13.85□□□□□ -0.19
NME3-205ENST00000563854 VEGFCP49767 419 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 FABP5Q01469 135 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 RPL39P5Q59GN2 51 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 FAM131AQ6UXB0 335 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 PRSS48Q7RTY5 328 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 OR8U1Q8NH10 309 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 MGLLQ99685 303 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 ISYNA1Q9NPH2 558 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms