RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 LINC00574Q9H8X3 128 aa7.47□□□□□ -1.21
HDGFL3-204ENST00000563790 REEP1Q9H902 201 aa7.47□□□□□ -1.21
HDGFL3-204ENST00000563790 ARL8BQ9NVJ2 186 aa7.47□□□□□ -1.21
HDGFL3-204ENST00000563790 ZNF446Q9NWS9 450 aa7.47□□□□□ -1.21
HDGFL3-204ENST00000563790 OR52A1Q9UKL2 312 aa7.47□□□□□ -1.21
HDGFL3-204ENST00000563790 FAM230AA0A1W2PPH8 454 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 LOC110117498-PIK3R3F6TDL0 507 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 RS1O15537 224 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 INMTO95050 263 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 S1PR2O95136 353 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 IGHV3-7P01780 117 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 CSN2P05814 226 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 CALCBP10092 127 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 OSMP13725 252 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 BCL3P20749 454 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 GABRR1P24046 479 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 PTGFRP43088 359 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 RIDAP52758 137 aaKnown RBP7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 CDK5R1Q15078 307 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 MMDQ15546 238 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 TMEM30BQ3MIR4 351 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 ODF3L2Q3SX64 289 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 AKIRIN2Q53H80 203 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 LIN54Q6MZP7 749 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 Q6P435 159 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 ZNF322Q6U7Q0 402 aaPredicted RBP7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 BCDIN3DQ7Z5W3 292 aaKnown RBP7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 SLC38A6Q8IZM9 456 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 DEFB107AQ8IZN7 70 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 FAM58AQ8N1B3 248 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 OR10X1Q8NGY0 326 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 GIPC3Q8TF64 312 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 SNAPC3Q92966 411 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 ATG101Q9BSB4 218 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 ANKRD60Q9BZ19 345 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 HMG20AQ9NP66 347 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 A3GALT2U3KPV4 340 aa7.46□□□□□ -1.22
HDGFL3-204ENST00000563790 ODAMA1E959 279 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 OR2H2O95918 312 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 HMGN1P05114 100 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 NPY1RP25929 384 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 ERVFC1-1P60608 527 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 CDC42P60953 191 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 CXCR4P61073 352 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 AESQ08117 197 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 GK3PQ14409 553 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 SPIN3Q5JUX0 258 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 BCL2L15Q5TBC7 163 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 AADACL4Q5VUY2 407 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 ADGRG5Q8IZF4 528 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 CD300LFQ8TDQ1 290 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 EMG1Q92979 244 aaKnown RBP7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 LEAP2Q969E1 77 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 C6orf62Q9GZU0 229 aaPredicted RBP7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 COMMD4Q9H0A8 199 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 MLXQ9UH92 298 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 RNF150Q9ULK6 438 aa7.45□□□□□ -1.22
HDGFL3-204ENST00000563790 TRAV25A0A0B4J276 109 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 M0R129 80 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 SIRPB1O00241 398 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 PRKYO43930 277 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 SNX3O60493 162 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 PRKACGP22612 351 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 CBLN1P23435 193 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 FUT6P51993 359 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 RPS7P62081 194 aaKnown RBP7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 C5orf64Q2M2E5 130 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 SLX4IPQ5VYV7 408 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 Q8IYB0 196 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 ENTHD1Q8IYW4 607 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 PRSS35Q8N3Z0 413 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 DNAAF1Q8NEP3 725 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 RTN4IP1Q8WWV3 396 aaPredicted RBP7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 ADAT3Q96EY9 351 aaPredicted RBP7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 ELAC2Q9BQ52 826 aaKnown RBP7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 Q9N2K0 584 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 IKZF2Q9UKS7 526 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 SNX5Q9Y5X3 404 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 TMEM14AQ9Y6G1 99 aa7.44□□□□□ -1.22
HDGFL3-204ENST00000563790 KBTBD11-OT1A0A1B0GTJ5 212 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 ZNF729A6NN14 1252 aaPredicted RBP7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 NPIPB11E5RHQ5 1161 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 SLC33A1O00400 549 aaPredicted RBP7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 KDM4BO94953 1096 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 HTR3BO95264 441 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 PRKACAP17612 351 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 AADACP22760 399 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 EPHA2P29317 976 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 PDZK1IP1Q13113 114 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 UNQ5815/PRO19632Q6UWF5 114 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 SLC35F2Q8IXU6 374 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 CACNG8Q8WXS5 425 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 RNF125Q96EQ8 232 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 CLN6Q9NWW5 311 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 TAGLN3Q9UI15 199 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 ZNF221Q9UK13 617 aa7.43□□□□□ -1.22
HDGFL3-204ENST00000563790 H3BUA1 57 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms