RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 HLA-DQB1P01920 261 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MT-ND4P03905 459 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 OPN1MWP04001 364 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MSMBP08118 114 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MELTFP08582 738 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 OPN1MW2P0DN77 364 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 OPN1MW3P0DN78 364 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 PTHLHP12272 177 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 NDUFB7P17568 137 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 ELK1P19419 428 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 CDK2P24941 298 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 ERP29P30040 261 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MNDAP41218 407 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 GLIPR1P48060 266 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 DLX6P56179 175 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 TAS2R20P59543 309 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 GNB2P62879 340 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 AESQ08117 197 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 EDDM3AQ14507 147 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 ATXN7L3Q14CW9 347 aaPredicted RBP4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 ZNF260Q3ZCT1 412 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 LRRC10Q5BKY1 277 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 IGSF11Q5DX21 431 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 UBE2NLQ5JXB2 153 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 SLC35E4Q6ICL7 350 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 ZNF880Q6PDB4 577 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 Q6ZTK2 550 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 C5orf24Q7Z6I8 188 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 TPRX1Q8N7U7 411 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 OR4M1Q8NGD0 313 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 OR5D13Q8NGL4 314 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MCFD2Q8NI22 146 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MRPL30Q8TCC3 161 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 FAM216AQ8WUB2 273 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 RAB3CQ96E17 227 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 TMEM68Q96MH6 324 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 NEDD4LQ96PU5 975 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 SOSTQ9BQB4 213 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 HDHD3Q9BSH5 251 aaPredicted RBP4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 AUNIPQ9H7T9 357 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 LPAR2Q9HBW0 351 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 MMP26Q9NRE1 261 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 C19orf12Q9NSK7 152 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 KIF25Q9UIL4 384 aa4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 RPUSD1Q9UJJ7 312 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-207ENST00000563781 NAV3Q8IVL0 2385 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 TRBV6-6A0A0A6YYG2 114 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 PPIAL4CA0A0B4J2A2 164 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 TMEM30CPA0ZSE6 113 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 MEX3AA1L020 520 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 TMEM235A6NFC5 223 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 MARCH11A6NNE9 402 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 B4DSR2 109 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 MCRIP1C9JLW8 97 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 XRCC3O43542 346 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CA11O75493 328 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CLPXO76031 633 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 SCGNO76038 276 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 ECDO95905 644 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 PPIAL4GP0DN37 164 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CGB3P0DN86 165 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CGB7P0DN87 165 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 MMP9P14780 707 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 GNB3P16520 340 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CCL3L1P16619 93 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 TNFSF8P32971 234 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 DVL1P1P54792 670 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 EDDM3BP56851 147 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 RIPPLY3P57055 190 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 RPL31P62899 125 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 RELQ04864 619 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 MEF2CQ06413 473 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 MADCAM1Q13477 382 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 RBM39Q14498 530 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 FAM189A2Q15884 450 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CD300EQ496F6 205 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CDNFQ49AH0 187 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 METTL11BQ5VVY1 283 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 HACD4Q5VWC8 232 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CNIH2Q6PI25 160 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 GDPD3Q7L5L3 318 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 CCDC190Q86UF4 302 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 C11orf42Q8N5U0 333 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 KIR3DL3Q8N743 410 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 Q8N7P7 452 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 LINC00469Q8N7U9 141 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 OR6Q1Q8NGQ2 317 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 OR13A1Q8NGR1 328 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 OR4K15Q8NH41 348 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 NEK7Q8TDX7 302 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 NUDCD2Q8WVJ2 157 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 H1FXQ92522 213 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 C18orf12Q96KH6 178 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 SMR3AQ99954 134 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 C6orf62Q9GZU0 229 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 SLC5A7Q9GZV3 580 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 SIRPDQ9H106 197 aa4.25□□□□□ -1.73
HERPUD1-207ENST00000563781 LINC00574Q9H8X3 128 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms