RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 KRTCAP3Q53RY4 240 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TMEM190Q8WZ59 177 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 PPIAL4DF5H284 164 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TSPAN2O60636 221 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 GPR3P46089 330 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 HBBP68871 147 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 MORN2Q502X0 79 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TAF15Q92804 592 aaKnown RBP eCLIP5.47□□□□□ -1.53
CLK3-212ENST00000563418 MRPL27Q9P0M9 148 aaKnown RBP5.47□□□□□ -1.53
CLK3-212ENST00000563418 DAPP1Q9UN19 280 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 DOCK1Q14185 1865 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 RTN4RL2Q86UN3 420 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 C9orf40Q8IXQ3 194 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 OR51G1Q8NGK1 321 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 STRCQ7RTU9 1775 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 SELPP16109 830 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 FAM110CQ1W6H9 321 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 PIMREGQ9BSJ6 248 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 CYTL1Q9NRR1 136 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 TAAR3PQ9P1P4 343 aa5.47□□□□□ -1.53
CLK3-212ENST00000563418 OR9G9P0C7N8 305 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 CD70P32970 193 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 RUNX1Q01196 453 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 MEF2CQ06413 473 aaPredicted RBP5.46□□□□□ -1.53
CLK3-212ENST00000563418 ZNF740Q8NDX6 193 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 LINC00615Q96LM1 132 aaPredicted RBP5.46□□□□□ -1.53
CLK3-212ENST00000563418 SHISA3A0PJX4 238 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 EPPINO95925 133 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 RPL23P62829 140 aaKnown RBP5.46□□□□□ -1.53
CLK3-212ENST00000563418 ERHP84090 104 aaKnown RBP5.46□□□□□ -1.53
CLK3-212ENST00000563418 PMVKQ15126 192 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 DOLPP1Q86YN1 238 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 ZNF611Q8N823 705 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 PERPQ96FX8 193 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 CLEC1BQ9P126 229 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 PSG11Q9UQ72 335 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 KLHDC2Q9Y2U9 406 aa5.46□□□□□ -1.53
CLK3-212ENST00000563418 EML2O95834 649 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 NANOS3P60323 173 aaKnown RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 NR0B2Q15466 257 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 ZNF788Q6ZQV5 615 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 DNM1P46Q6ZS02 220 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 OLIG3Q7RTU3 272 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 PDPNQ86YL7 162 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 BCORP1Q8N888 145 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 OR2Z1Q8NG97 314 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 KLF16Q9BXK1 252 aaPredicted RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 KCNE3Q9Y6H6 103 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 FAM181BA6NEQ2 426 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 IGLV3-27P01718 113 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 DRD1P21728 446 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 UBE2L3P68036 154 aaKnown RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 SRSF6Q13247 344 aaKnown RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 FADS6Q8N9I5 356 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 TMEM116Q8NCL8 245 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 OR2M3Q8NG83 312 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 HARBI1Q96MB7 349 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 INSM2Q96T92 566 aaPredicted RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 LINC00597Q9H2U6 94 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 AP5S1Q9NUS5 200 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 OCIAD1Q9NX40 245 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 MSGN1A6NI15 193 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 PTGER1P34995 402 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 GAGE5Q13069 117 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 GAGE6Q13070 117 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 KIRREL2Q6UWL6 708 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 MGST2Q99735 147 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 TTC9CQ8N5M4 171 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 SLC25A40Q8TBP6 338 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 MYOZ3Q8TDC0 251 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 SPSB4Q96A44 273 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 GALMQ96C23 342 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 SLC25A2Q9BXI2 301 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 DOCK11Q5JSL3 2073 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 LOC105371242A0A075B767 164 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 PPIAL4CA0A0B4J2A2 164 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 IGLON5A6NGN9 336 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 PPIAL4GP0DN37 164 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 SUMO3P55854 103 aaPredicted RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 OTPQ5XKR4 325 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 LHFPL4Q7Z7J7 247 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 DMRTC2Q8IXT2 367 aaPredicted RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 OR4D11Q8NGI4 311 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 CNRIP1Q96F85 164 aaPredicted RBP5.46□□□□□ -1.54
CLK3-212ENST00000563418 HEATR5AQ86XA9 2040 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 TANC1Q9C0D5 1861 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 PSMB11A5LHX3 300 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 K7EP34 96 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 SH2D1BO14796 132 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 AZU1P20160 251 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 ADMP35318 185 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 TMEM95Q3KNT9 176 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 OR1B1Q8NGR6 318 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 ZNF414Q96IQ9 312 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 POM121L2Q96KW2 1035 aa5.46□□□□□ -1.54
CLK3-212ENST00000563418 OR2T8A6NH00 312 aa5.45□□□□□ -1.54
CLK3-212ENST00000563418 GALR2O43603 387 aaPredicted RBP5.45□□□□□ -1.54
CLK3-212ENST00000563418 SLURP2P0DP57 97 aa5.45□□□□□ -1.54
CLK3-212ENST00000563418 CAPZBP47756 277 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms