RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	CCDC124	Q96CT7	223 aa	Known RBP	6.29	□□□□□ -1.4
CKLF-208	ENST00000563092	CPNE2	Q96FN4	548 aa	Predicted RBP	6.29	□□□□□ -1.4
CKLF-208	ENST00000563092	TMED9	Q9BVK6	235 aa		6.29	□□□□□ -1.4
CKLF-208	ENST00000563092	MBNL3	Q9NUK0	354 aa	Known RBP	6.29	□□□□□ -1.4
CKLF-208	ENST00000563092	CNOT2	Q9NZN8	540 aa	Known RBP	6.29	□□□□□ -1.4
CKLF-208	ENST00000563092	ARL2BP	Q9Y2Y0	163 aa		6.29	□□□□□ -1.4
CKLF-208	ENST00000563092		H3BUA1	57 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	AIP	O00170	330 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	RRH	O14718	337 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	SPINT2	O43291	252 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	DCTN3	O75935	186 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	OR7C1	O76099	320 aa	Predicted RBP	6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	TFAP2A	P05549	437 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	HTR1A	P08908	422 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	ALDH3A2	P51648	485 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	TPPP2	P59282	170 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	ADARB1	P78563	741 aa	Known RBP	6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	TMEM267	Q0VDI3	215 aa	Predicted RBP	6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	ACTBL2	Q562R1	376 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	SLC25A30	Q5SVS4	291 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	C6orf183	Q5T699	404 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	SYT6	Q5T7P8	510 aa	Predicted RBP	6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	FAM71F2	Q6NXP2	309 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	ZNF562	Q6V9R5	426 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	ZNF554	Q86TJ5	538 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	PPP1R27	Q86WC6	154 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	OR10V1	Q8NGI7	309 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	OR1L1	Q8NH94	360 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	GATAD1	Q8WUU5	269 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	RFK	Q969G6	155 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	ABHD14A	Q9BUJ0	271 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	RSRP1	Q9BUV0	290 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	GABARAPL1	Q9H0R8	117 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	RAB9B	Q9NP90	201 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	GNG12	Q9UBI6	72 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	RNF150	Q9ULK6	438 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	GAB2	Q9UQC2	676 aa		6.28	□□□□□ -1.4
CKLF-208	ENST00000563092	TMEM212	A6NML5	194 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	ZNF785	A8K8V0	405 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	YPEL1	O60688	119 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	CDRT1	O95170	752 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	HTR3B	O95264	441 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	FADS2	O95864	444 aa	Known RBP	6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	RCC1	P18754	421 aa	Predicted RBP	6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	RAB3A	P20336	220 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	ATP6V1E1	P36543	226 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	POLR2I	P36954	125 aa	Known RBP	6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	HTD2	P86397	168 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	GNMT	Q14749	295 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	LPCAT4	Q643R3	524 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	TRAT1	Q6PIZ9	186 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	SYS1	Q8N2H4	156 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	RGP1	Q92546	391 aa	Predicted RBP	6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	NSL1	Q96IY1	281 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	MS4A10	Q96PG2	267 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	YPEL2	Q96QA6	119 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	ST6GALNAC5	Q9BVH7	336 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	JAM3	Q9BX67	310 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	GABARAPL3	Q9BY60	117 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	FAM107B	Q9H098	131 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	IFI27L2	Q9H2X8	130 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	FBXL15	Q9H469	300 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	RIBC2	Q9H4K1	309 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	PLEKHA3	Q9HB20	300 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	MED4	Q9NPJ6	270 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	ENOPH1	Q9UHY7	261 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	JPT1	Q9UK76	154 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	DHDH	Q9UQ10	334 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	EXOG	Q9Y2C4	368 aa	Known RBP	6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	VPS13D	Q5THJ4	4388 aa		6.27	□□□□□ -1.41
CKLF-208	ENST00000563092	SAA2-SAA4	A0A096LPE2	208 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	DAPL1	A0PJW8	107 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	NUPR2	A6NF83	97 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092		E9PI62	339 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	CA11	O75493	328 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	OR2A4	O95047	310 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	TRGV3	P03979	118 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	CSTB	P04080	98 aa	Known RBP	6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	SAA2	P0DJI9	122 aa	Predicted RBP	6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	ATF4	P18848	351 aa	Predicted RBP	6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	CALB2	P22676	271 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	OR3A3	P47888	321 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	SYNJ2BP	P57105	145 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	SSBP2	P81877	361 aa	Predicted RBP	6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	ZNF343	Q6P1L6	599 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	UNQ5815/PRO19632	Q6UWF5	114 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	ACBD7	Q8N6N7	88 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	POC5	Q8NA72	575 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	LFNG	Q8NES3	379 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	OR5AN1	Q8NGI8	311 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	OR4K15	Q8NH41	348 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	TRUB1	Q8WWH5	349 aa	Known RBP	6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	C4orf36	Q96KX1	117 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	RDH12	Q96NR8	316 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	GPER1	Q99527	375 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	CIB1	Q99828	191 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	RNF5	Q99942	180 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	NEURL2	Q9BR09	285 aa		6.26	□□□□□ -1.41
CKLF-208	ENST00000563092	OVOL2	Q9BRP0	275 aa		6.26	□□□□□ -1.41

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