RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZNF791Q3KP31 576 aaPredicted RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 SHISA6Q6ZSJ9 500 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 SIGLECL1Q8N7X8 197 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 IL17DQ8TAD2 202 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 S100A16Q96FQ6 103 aaKnown RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 GGTLC1Q9BX51 225 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 TVP23BQ9NYZ1 205 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 CCNL1Q9UK58 526 aaPredicted RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 MEIS3P1A6NDR6 274 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 TNFSF11O14788 317 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 SP1P08047 785 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 CD38P28907 300 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 POU3F1Q03052 451 aaPredicted RBP8.02□□□□□ -1.13
CDH1-205ENST00000562836 CXCL9Q07325 125 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 GLB1LQ6UWU2 654 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 ZNF841Q6ZN19 808 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 SH2D6Q7Z4S9 175 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 RBMXL3Q8N7X1 1067 aaKnown RBP8.02□□□□□ -1.13
CDH1-205ENST00000562836 OR10P1Q8NGE3 313 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 OR13A1Q8NGR1 328 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 AQP3Q92482 292 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 PELI1Q96FA3 418 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
CDH1-205ENST00000562836 PAAF1Q9BRP4 392 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 TM2D1Q9BX74 207 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 ABRACLQ9P1F3 81 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 LINC00312Q9Y6C7 94 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 A0A1B0GTL3 188 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 E9PLN8 166 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 FNDC10F2Z333 226 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 ISLRO14498 428 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 SYNGR1O43759 233 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 CLDN7O95471 211 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 CGAP01215 116 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 CT62P0C5K7 136 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 HTR1DP28221 377 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 IGFBP7Q16270 282 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 TBC1D28Q2M2D7 210 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 CEACAM19Q7Z692 300 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 TMEM173Q86WV6 379 aaPredicted RBP8.02□□□□□ -1.13
CDH1-205ENST00000562836 VSTM2AQ8TAG5 236 aa8.02□□□□□ -1.13
CDH1-205ENST00000562836 GEMIN6Q8WXD5 167 aaKnown RBP8.02□□□□□ -1.13
CDH1-205ENST00000562836 TRBV4-1A0A0J9YWV2 114 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 GASTP01350 101 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 IGLL1P15814 213 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 COL8A1P27658 744 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 GALR1P47211 349 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 NDUFV3P56181 108 aaKnown RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 LINC00310P59036 64 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 GLYATL3Q5SZD4 288 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 Q6AWC8 147 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 FAM166AQ6J272 317 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 POC1AQ8NBT0 407 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 SYT8Q8NBV8 401 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 OR6K6Q8NGW6 343 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 OR8S1Q8NH09 359 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 RHOJQ9H4E5 214 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 VSIG4Q9Y279 399 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 POLDIP2Q9Y2S7 368 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 TRAPPC1Q9Y5R8 145 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 COL2A1P02458 1487 aaPredicted RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 A0A1W2PPK0 400 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 C15orf65H3BRN8 121 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 SNRNP200O75643 2136 aaKnown RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 CATP04040 527 aaKnown RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 IER3P46695 156 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 FKBP1AP62942 108 aaKnown RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 WFDC2Q14508 124 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 OPN5Q6U736 354 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 C16orf82Q7Z2V1 217 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 FAM213BQ8TBF2 198 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 MBD6Q96DN6 1003 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 AQP10Q96PS8 301 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 RNASE7Q9H1E1 156 aaKnown RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 IL21Q9HBE4 155 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 TP53TG3Q9ULZ0 132 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 SOX21Q9Y651 276 aaPredicted RBP8.01□□□□□ -1.13
CDH1-205ENST00000562836 BTAF1O14981 1849 aa8.01□□□□□ -1.13
CDH1-205ENST00000562836 CGB1A6NKQ9 187 aa8□□□□□ -1.13
CDH1-205ENST00000562836 ZNF253O75346 499 aa8□□□□□ -1.13
CDH1-205ENST00000562836 REG1AP05451 166 aa8□□□□□ -1.13
CDH1-205ENST00000562836 SRIP30626 198 aa8□□□□□ -1.13
CDH1-205ENST00000562836 C6orf136Q5SQH8 315 aa8□□□□□ -1.13
CDH1-205ENST00000562836 SBSNQ6UWP8 590 aa8□□□□□ -1.13
CDH1-205ENST00000562836 CISD2Q8N5K1 135 aaKnown RBP8□□□□□ -1.13
CDH1-205ENST00000562836 OR5D14Q8NGL3 314 aa8□□□□□ -1.13
CDH1-205ENST00000562836 TSC2P49815 1807 aa8□□□□□ -1.13
CDH1-205ENST00000562836 A0A1W2PPV9 198 aa8□□□□□ -1.13
CDH1-205ENST00000562836 J3KT08 172 aa8□□□□□ -1.13
CDH1-205ENST00000562836 TAPBPO15533 448 aa8□□□□□ -1.13
CDH1-205ENST00000562836 IGHG4P01861 327 aa8□□□□□ -1.13
CDH1-205ENST00000562836 CSN3P07498 182 aa8□□□□□ -1.13
CDH1-205ENST00000562836 ZNF146Q15072 292 aa8□□□□□ -1.13
CDH1-205ENST00000562836 ETDBQ3ZM63 59 aa8□□□□□ -1.13
CDH1-205ENST00000562836 SYT14P1Q58G82 188 aa8□□□□□ -1.13
CDH1-205ENST00000562836 CBLL1Q75N03 491 aa8□□□□□ -1.13
CDH1-205ENST00000562836 SLC35F2Q8IXU6 374 aa8□□□□□ -1.13
CDH1-205ENST00000562836 RAB42Q8N4Z0 105 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms