RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PARP11Q9NR21 331 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 VSIG4Q9Y279 399 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 STAB2Q8WWQ8 2551 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 NBR2O15453 112 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 PDCD6O75340 191 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 BAG2O95816 211 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR3A3P47888 321 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF616Q08AN1 781 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF833PQ6ZTB9 187 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF554Q86TJ5 538 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 FAM46BQ96A09 425 aa12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CHCHD3Q9NX63 227 aaKnown RBP12.96□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 TRAV41A0A0B4J266 112 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 YPEL1O60688 119 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CHATP28329 748 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 BLVRBP30043 206 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 RAB9AP51151 201 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 INSL3P51460 131 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 HTD2P86397 168 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 NDPQ00604 133 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ST3GAL4Q11206 333 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 MED21Q13503 144 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 C5orf64Q2M2E5 130 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 NKAIN3Q8N8D7 197 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 NPBQ8NG41 125 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CYGBQ8WWM9 190 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 YPEL2Q96QA6 119 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ZNF251Q9BRH9 671 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FBXO7Q9Y3I1 522 aa12.95□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 NDUFA3O95167 84 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LY86O95711 162 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CELP19835 753 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 TAS2R43P59537 309 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LRRC36Q1X8D7 754 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LY6G6FQ5SQ64 297 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LAIR2Q6ISS4 152 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LIN54Q6MZP7 749 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 DCUN1D4Q92564 292 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SULT4A1Q9BR01 284 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 IFI27L2Q9H2X8 130 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ISYNA1Q9NPH2 558 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SMAD5-AS1Q9Y6J3 95 aa12.94□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SOX15O60248 233 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CD1AP06126 327 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 INSL4Q14641 139 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 HMGN3Q15651 99 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 TTC23Q5W5X9 447 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 OR10K2Q6IF99 312 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SETD9Q8NE22 299 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CASTOR1Q8WTX7 329 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 GALMQ96C23 342 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CST11Q9H112 138 aa12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 DYNC2H1Q8NCM8 4307 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 C3orf84H3BNL1 204 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 OVOL1O14753 267 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ST8SIA5O15466 376 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 RGS11O94810 467 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ECSCRQ19T08 205 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FAM131AQ6UXB0 335 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 OR2AK2Q8NG84 335 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 TPSG1Q9NRR2 321 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CNOT2Q9NZN8 540 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SACSQ9NZJ4 4579 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 A0A1W2PN81 502 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 MYL12BO14950 172 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 GNAO1P09471 354 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CHRNA7P36544 502 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SLURP1P55000 103 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 WNT4P56705 351 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FAM27D1Q5T7N8 215 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FAM71F2Q6NXP2 309 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 AHSA2Q719I0 299 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SVOPQ8N4V2 548 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 KIAA1456Q9P272 454 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 PSORS1C1Q9UIG5 152 aa12.91□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FCN1O00602 326 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 SAP30O75446 220 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 EGR2P11161 476 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 HTR2CP28335 458 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms