RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CAPSLQ8WWF8 208 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 RTN4IP1Q8WWV3 396 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 SLC25A38Q96DW6 304 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 FUNDC2Q9BWH2 189 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 PARP12Q9H0J9 701 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 ATG5Q9H1Y0 275 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 ELF5Q9UKW6 265 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 MGAM2Q2M2H8 2515 aa12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 RPS19P39019 145 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 SCAND1P57086 179 aa12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 LSM3P62310 102 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 WIPF2Q8TF74 440 aaPredicted RBP12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 SLC25A33Q9BSK2 321 aa12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 PRSS22Q9GZN4 317 aa12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 ABRACLQ9P1F3 81 aa12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 MGAT4AQ9UM21 535 aa12.18□□□□□ -0.46
SNRPA1-213ENST00000560856 IGHV3-72A0A0B4J1Y9 119 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 SERPINE3A8MV23 424 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 ZNF736B4DX44 427 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 ITGB1BP1O14713 200 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 LANCL1O43813 399 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 FCGR3AP08637 254 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 CD3GP09693 182 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 FAM106CPP0CH98 169 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 IL3RAP26951 378 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 CDNFQ49AH0 187 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 IDNKQ5T6J7 187 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 Q8N6K4 173 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 OR2T6Q8NHC8 308 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 IL1F10Q8WWZ1 152 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 RBMXL1Q96E39 390 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 ABHD14AQ9BUJ0 271 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 IFI27L2Q9H2X8 130 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 RHBDL2Q9NX52 303 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 PKD1L1Q8TDX9 2849 aa12.17□□□□□ -0.46
SNRPA1-213ENST00000560856 A0A075B6Q4 140 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 TRDCB7Z8K6 153 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 TMEM127O75204 238 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 RGS11O94810 467 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 TFAP2AP05549 437 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 CD1BP29016 333 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 ALDH3B2P48448 385 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 C11orf88Q6PI97 169 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 IZUMO1Q8IYV9 350 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 LYG1Q8N1E2 194 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 DTX3Q8N9I9 347 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 ZNF251Q9BRH9 671 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 AGMATQ9BSE5 352 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 WNT10AQ9GZT5 417 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-213ENST00000560856 CMYA5Q8N3K9 4069 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 IGKV1D-8A0A087WSZ0 117 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 ST8SIA5O15466 376 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 IGKV1D-33P01593 117 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 IGKV1-33P01594 117 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 OR3A3P47888 321 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 NCS1P62166 190 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 HNF4GQ14541 408 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 SRSF7Q16629 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 TMEM95Q3KNT9 176 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 Q6ZS49 121 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 ZNF833PQ6ZTB9 187 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 TGIF2LXQ8IUE1 241 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 AKR1E2Q96JD6 320 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 CABLES2Q9BTV7 478 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 NAA50Q9GZZ1 169 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 C11orf54Q9H0W9 315 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 PLSCR3Q9NRY6 295 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 SLC23A1Q9UHI7 598 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 SPATA2Q9UM82 520 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 VWFP04275 2813 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 NBEAL1Q6ZS30 2694 aa12.15□□□□□ -0.46
SNRPA1-213ENST00000560856 SAA2-SAA4A0A096LPE2 208 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 SH2D7A6NKC9 451 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 FABP7O15540 132 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 TXNL1O43396 289 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 PROP1O75360 226 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 GSTP1P09211 210 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 GSTT2P0CG29 244 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 GSTT2BP0CG30 244 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 SAA2P0DJI9 122 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 TMEM11P17152 192 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 CEACAM6P40199 344 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 HES1Q14469 280 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 ABCA11PQ4W5N1 156 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 IGSF11Q5DX21 431 aa12.14□□□□□ -0.47
SNRPA1-213ENST00000560856 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms