RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OR5AC2Q9NZP5 309 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4Q9UBX2 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 PPIAL4AQ9Y536 164 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 PLCE1Q9P212 2302 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 NKX6-3A6NJ46 265 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 TNFRSF13BO14836 293 aaPredicted RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 BCL2L11O43521 198 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 VDAC1P21796 283 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 GNLYP22749 145 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 PPP1CCP36873 323 aaKnown RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 AP2S1P53680 142 aaPredicted RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 EDDM3BP56851 147 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 EIF4EBP1Q13541 118 aaPredicted RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 NMSQ5H8A3 153 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 FAM216BQ8N7L0 139 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 OR4D5Q8NGN0 318 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 RFESDQ8TAC1 157 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 CORO2AQ92828 525 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 AQP10Q96PS8 301 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 SPIN2AQ99865 258 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 SPIN2BQ9BPZ2 258 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 LINC00574Q9H8X3 128 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 LIN7CQ9NUP9 197 aaKnown RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 CHD3Q12873 2000 aaKnown RBP10.71□□□□□ -0.69
SNX1-211ENST00000560829 RNF212BA8MTL3 300 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 YPEL1O60688 119 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 DEDDO75618 318 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 UQCRFS1P47985 274 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 OR1S1Q8NH92 325 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 EDARADDQ8WWZ3 215 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 CCL17Q92583 94 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 RRNAD1Q96FB5 475 aaKnown RBP10.71□□□□□ -0.69
SNX1-211ENST00000560829 YPEL2Q96QA6 119 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 AGMATQ9BSE5 352 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 CALYQ9NYX4 217 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 UBQLN2Q9UHD9 624 aa10.71□□□□□ -0.69
SNX1-211ENST00000560829 SMG1Q96Q15 3661 aaKnown RBP10.71□□□□□ -0.7
SNX1-211ENST00000560829 NBEAQ8NFP9 2946 aa10.71□□□□□ -0.7
SNX1-211ENST00000560829 PCNX1Q96RV3 2341 aa10.71□□□□□ -0.7
SNX1-211ENST00000560829 KANTRA0A1W2PQU2 76 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 FSTL3O95633 263 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 MBPP02686 304 aaPredicted RBP10.7□□□□□ -0.7
SNX1-211ENST00000560829 RLN2P04090 185 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 SERPINE2P07093 398 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 HTR2BP41595 481 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 PPOXP50336 477 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 LOXL3P58215 753 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 S100A10P60903 97 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 C17orf58Q2M2W7 97 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 FAM53AQ6NSI3 398 aaPredicted RBP10.7□□□□□ -0.7
SNX1-211ENST00000560829 OR51H1Q8NH63 302 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 OR2D2Q9H210 308 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 PLEKHF2Q9H8W4 249 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
SNX1-211ENST00000560829 TRGV10A0A0A0MS01 117 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 IGHV1-69-2A0A0G2JMI3 117 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 KBTBD11-OT1A0A1B0GTJ5 212 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 ZG16O60844 167 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 SLC25A6P12236 298 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 SMCO1Q147U7 214 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 MORN2Q502X0 79 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 TCF23Q7RTU1 214 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 SLC7A5P1Q8MH63 180 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 OR52M1Q8NGK5 317 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 ABHD14BQ96IU4 210 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 CLN8Q9UBY8 286 aa10.7□□□□□ -0.7
SNX1-211ENST00000560829 IGHV3-43A0A0B4J1X8 118 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 ZNF729A6NN14 1252 aaPredicted RBP10.69□□□□□ -0.7
SNX1-211ENST00000560829 K7EPK0 472 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 TMPRSS2O15393 492 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 IGHV3-43DP0DP04 118 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 NUP62P37198 522 aaPredicted RBP10.69□□□□□ -0.7
SNX1-211ENST00000560829 UBA52P62987 128 aaKnown RBP10.69□□□□□ -0.7
SNX1-211ENST00000560829 MEF2CQ06413 473 aaPredicted RBP10.69□□□□□ -0.7
SNX1-211ENST00000560829 ZNF585BQ52M93 769 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 FAM71E2Q8N5Q1 922 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 TCTEX1D1Q8N7M0 179 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 LSM10Q969L4 123 aaKnown RBP10.69□□□□□ -0.7
SNX1-211ENST00000560829 ARPC5LQ9BPX5 153 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 GNG12Q9UBI6 72 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 RNF150Q9ULK6 438 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 POMT1Q9Y6A1 747 aa10.69□□□□□ -0.7
SNX1-211ENST00000560829 RPS10-NUDT3A0A1W2PQS6 291 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 MEX3AA1L020 520 aaKnown RBP10.68□□□□□ -0.7
SNX1-211ENST00000560829 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 E5RGE8 158 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 ST8SIA3O43173 380 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 NDUFA2O43678 99 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 IGKV1-39P01597 117 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 IGKV1D-39P04432 117 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 ZNF66Q6ZN08 573 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 FAM219AQ8IW50 185 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 SDHAF2Q9NX18 166 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 SLC25A10Q9UBX3 287 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms