RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 GATA4P43694 442 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 OR3A1P47881 315 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 PAX9P55771 341 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 RAB2AP61019 212 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 HBG1P69891 147 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 HBG2P69892 147 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 NKX6-1P78426 367 aaPredicted RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 EIF4EBP1Q13541 118 aaPredicted RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 CXorf66Q5JRM2 361 aaPredicted RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 PUSL1Q8N0Z8 303 aaKnown RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 DRAM1Q8N682 238 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 OR51H1Q8NH63 302 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 RNASE11Q8TAA1 199 aaKnown RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 BSCL2Q96G97 398 aaPredicted RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 SNX22Q96L94 193 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 HSD17B10Q99714 261 aaKnown RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 MS4A7Q9GZW8 240 aaPredicted RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 UNKLQ9H9P5 680 aaKnown RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 GAB2Q9UQC2 676 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 FAM157AC9JC47 383 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 MKRN2OSH3BPM6 223 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 TSPAN4O14817 238 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 MGST3O14880 152 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 PSPNO60542 156 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
RTF1-206ENST00000560447 HBZP02008 142 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 PRH1P02810 166 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 SFTA3P0C7M3 94 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 OR8U9P0C7N5 309 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 DYNLT3P51808 116 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 AKR1C2P52895 323 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 KLF3P57682 345 aaPredicted RBP8.14□□□□□ -1.11
RTF1-206ENST00000560447 SELENOVP59797 346 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 GUK1Q16774 197 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 ATP6V1FQ16864 119 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 ZNF585BQ52M93 769 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 KRBOX4Q5JUW0 171 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 ATRAIDQ6UW56 229 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 RBMXL3Q8N7X1 1067 aaKnown RBP8.14□□□□□ -1.11
RTF1-206ENST00000560447 OR5C1Q8NGR4 320 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 OR2G3Q8NGZ4 309 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 RBMXL1Q96E39 390 aaKnown RBP8.14□□□□□ -1.11
RTF1-206ENST00000560447 COQ2Q96H96 371 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 CIB3Q96Q77 187 aaPredicted RBP8.14□□□□□ -1.11
RTF1-206ENST00000560447 ELOVL5Q9NYP7 299 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 OR14J1Q9UGF5 321 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 JPT1Q9UK76 154 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 KCNS2Q9ULS6 477 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 FAM215AQ9Y5M1 114 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 DMDP11532 3685 aa8.14□□□□□ -1.11
RTF1-206ENST00000560447 TRAV1-1A0A0B4J248 108 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 RAB29O14966 203 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 TNFSF12O43508 249 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 SOX15O60248 233 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 ZNF737O75373 536 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 IGKV1-39P01597 117 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 IGKV1-5P01602 117 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 IGKV1D-39P04432 117 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 P0C879 139 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 PRDX2P32119 198 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 CD80P33681 288 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 FABP6P51161 128 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 SERF2P84101 59 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 FLI1Q01543 452 aaPredicted RBP8.13□□□□□ -1.11
RTF1-206ENST00000560447 COL10A1Q03692 680 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 TLE4Q04727 773 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 ZNF616Q08AN1 781 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 PRAMEF6Q5VXH4 476 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 FAM122CQ6P4D5 195 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 FAM180AQ6UWF9 173 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 C5orf24Q7Z6I8 188 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 MRGPRGQ86SM5 289 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 ODF3L1Q8IXM7 274 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 ZNF295-AS1Q8N0V1 137 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.13□□□□□ -1.11
RTF1-206ENST00000560447 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 NUP37Q8NFH4 326 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 OR8U1Q8NH10 309 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 LRRC29Q8WV35 223 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 DIRC2Q96SL1 478 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 SCRT1Q9BWW7 348 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 KIAA1456Q9P272 454 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 HSPB7Q9UBY9 170 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 CACNG5Q9UF02 275 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 PPP1R3CQ9UQK1 317 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
RTF1-206ENST00000560447 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 LOC100996750A0A140TA64 210 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 F2RL2O00254 374 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 RBFOX2O43251 390 aaKnown RBP eCLIP8.12□□□□□ -1.11
RTF1-206ENST00000560447 PPIHO43447 177 aaKnown RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 YPEL1O60688 119 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 CLDN14O95500 239 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 TMEM50AO95807 157 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 ATF4P18848 351 aaPredicted RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 TNFSF4P23510 183 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 KIR2DS2P43631 304 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms