RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 OR7G1Q8NGA0 311 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 OR5D18Q8NGL1 313 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 OR4C16Q8NGL9 310 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 OR5AK3PQ8NH89 298 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNRF2Q8NHG8 242 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 STOML3Q8TAV4 291 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SPPL2BQ8TCT7 592 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 GPR119Q8TDV5 335 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 LMX1AQ8TE12 382 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TNFAIP8L1Q8WVP5 186 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 PPWD1Q96BP3 646 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 LRRC45Q96CN5 670 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ACY3Q96HD9 319 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ATP6V1G3Q96LB4 118 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DNAJC30Q96LL9 226 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TMEM56Q96MV1 263 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 Q9BRP9 147 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNF426Q9BUY5 554 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 CDCA4Q9BXL8 241 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 POTEKPQ9BYX7 375 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SLC19A3Q9BZV2 496 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 NKX6-2Q9C056 277 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 CXCL16Q9H2A7 254 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TUBA4BQ9H853 241 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 WDR54Q9H977 334 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 C1orf109Q9NX04 203 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 PRO2289Q9P1D8 64 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 FBXL3Q9UKT7 428 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TP53TG1Q9Y2A0 90 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 WASHC3Q9Y3C0 194 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 MRPS16Q9Y3D3 137 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 FIS1Q9Y3D6 152 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 FAM215AQ9Y5M1 114 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DOCK6Q96HP0 2047 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DSCAML1Q8TD84 2053 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 PTPRJQ12913 1337 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TRPM3Q9HCF6 1732 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 MYO9BQ13459 2157 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 NPATQ14207 1427 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 NUP153P49790 1475 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 LCTP09848 1927 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 AK9Q5TCS8 1911 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 SLIT2O94813 1529 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 KMT2DO14686 5537 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 COL4A2P08572 1712 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 A0A0J9YX75 114 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 A0A1W2PQL4 384 aaPredicted RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 C19orf71A6NCJ1 209 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 FABP12A6NFH5 140 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 A8MWP6 167 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 B4DEV8 164 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 FTCDNL1E5RQL4 147 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 H3BPC8 53 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 KLRC4-KLRK1H3BQV0 150 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 TOR1AO14656 332 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CALUO43852 315 aaPredicted RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 NDUFS6O75380 124 aaKnown RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 STK16O75716 305 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 LY6HO94772 140 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 ASS1P00966 412 aaKnown RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 ORM1P02763 201 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CRYGDP07320 174 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CD7P09564 240 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 GZMBP10144 247 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CCL3P10147 92 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 IFI30P13284 250 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 NQO1P15559 274 aaKnown RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 HIST1H1CP16403 213 aaKnown RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 GZMHP20718 246 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 NPPCP23582 126 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 GADD45AP24522 165 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CD24P25063 80 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 PSMA1P25786 263 aaKnown RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 CRYBB3P26998 211 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 MIPP30301 263 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 HSPA9P38646 679 aaKnown RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 CD79BP40259 229 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 LPAR6P43657 344 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CD151P48509 253 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 DAPP51397 102 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 EMP2P54851 167 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 RWDD2BP57060 319 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 GABARAPL2P60520 117 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 DEFB103AP81534 67 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 TSPAN31Q12999 210 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 HES1Q14469 280 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 PDK2Q15119 407 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 ZNHIT3Q15649 155 aaPredicted RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 MAPK14Q16539 360 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 TPRXLQ17RH7 258 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 TBC1D28Q2M2D7 210 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 LGALS9BQ3B8N2 356 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 TMEM176BQ3YBM2 270 aaPredicted RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 MESTQ5EB52 335 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 ACSBG2Q5FVE4 666 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.28□□□□□ -2.36
SPG11-222ENST00000560435 SDHAF4Q5VUM1 108 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 SPATA31B1PQ5VZV4 182 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 LGALS9CQ6DKI2 356 aa0.28□□□□□ -2.36
SPG11-222ENST00000560435 LCN8Q6JVE9 175 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms