RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 RNF126Q9BV68 326 aa9.03□□□□□ -0.96
SNRPA1-211ENST00000560433 SLA2Q9H6Q3 261 aa9.03□□□□□ -0.96
SNRPA1-211ENST00000560433 ZNF665Q9H7R5 613 aa9.03□□□□□ -0.96
SNRPA1-211ENST00000560433 LSM5Q9Y4Y9 91 aaKnown RBP9.03□□□□□ -0.96
SNRPA1-211ENST00000560433 PPIAL4EA0A075B759 164 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 A0A0B4J2A0 478 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 PPIAL4DF5H284 164 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 MMP23AO75900 390 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 RNF224P0DH78 156 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 PPIAL4FP0DN26 164 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 P2RX3P56373 397 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 CLEC9AQ6UXN8 241 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 ZNF695Q8IW36 515 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 DRAM1Q8N682 238 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 RRNAD1Q96FB5 475 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 C18orf12Q96KH6 178 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 DIRC2Q96SL1 478 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 GON7Q9BXV9 100 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 NMES1Q9C002 83 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 GNG12Q9UBI6 72 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 SHPKQ9UHJ6 478 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 PSG11Q9UQ72 335 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 PPIAL4AQ9Y536 164 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 TANC2Q9HCD6 1990 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 IGHV1-69-2A0A0G2JMI3 117 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 MSGN1A6NI15 193 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 RGS13O14921 159 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 IFNA21P01568 189 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 ADH4P08319 380 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 NFYBP25208 207 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 ZNF134P52741 427 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 C6orf183Q5T699 404 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 TEX261Q6UWH6 196 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 TCF23Q7RTU1 214 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 LGI3Q8N145 548 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 BVESQ8NE79 360 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 PPP1R35Q8TAP8 253 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 ERGIC1Q969X5 290 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 SUCNR1Q9BXA5 334 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 ZNRD1Q9P1U0 126 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 LAMP3Q9UQV4 416 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 U3KQ87 197 aa9.02□□□□□ -0.97
SNRPA1-211ENST00000560433 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 HMSDA8MTL9 139 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 NPIPB11E5RHQ5 1161 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 SPINT2O43291 252 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 ADAM20O43506 726 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 MUC1P15941 1255 aaPredicted RBP9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 F2RP25116 425 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 S100A11P31949 105 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 RPL30P62888 115 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 FGL1Q08830 312 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 EFNB3Q15768 340 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 AVPI1Q5T686 147 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 SELENOHQ8IZQ5 122 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 SDSLQ96GA7 329 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 LURAP1Q96LR2 239 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 FAM234AQ9H0X4 552 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 TNFSF18Q9UNG2 199 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 ARHGAP32A7KAX9 2087 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 A0A0G2JRQ6 117 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 SLC31A2O15432 143 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 RAMP3O60896 148 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 SPDEFO95238 335 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 EPHA1P21709 976 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 HTR2BP41595 481 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 PRB3Q04118 309 aaPredicted RBP9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 OR1S1Q8NH92 325 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 H1FXQ92522 213 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 C19orf12Q9NSK7 152 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 CALYQ9NYX4 217 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 SLC25A10Q9UBX3 287 aaPredicted RBP9.01□□□□□ -0.97
SNRPA1-211ENST00000560433 TRAV38-1A0A0B4J264 116 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 LGALS8O00214 317 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 SIGLEC5O15389 551 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 IL15RAQ13261 267 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 EXOSC2Q13868 293 aaKnown RBP9□□□□□ -0.97
SNRPA1-211ENST00000560433 ZNF273Q14593 569 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 HFEQ30201 348 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 OR8H3Q8N146 312 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 TMEM204Q9BSN7 226 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 NDUFS7O75251 213 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 CDS2O95674 445 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 IGKV1-39P01597 117 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 MBPP02686 304 aaPredicted RBP9□□□□□ -0.97
SNRPA1-211ENST00000560433 IGKV1D-39P04432 117 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 CCL3L1P16619 93 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 GZMHP20718 246 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 CDKN1AP38936 164 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 GNG10P50151 68 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 DLX1P56177 255 aa9□□□□□ -0.97
SNRPA1-211ENST00000560433 LOXL3P58215 753 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms