RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 Q8N6K4 173 aa12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 OR56B1Q8NGI3 324 aa12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 ARHGAP5-AS1Q96IT6 56 aa12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 TXNL4BQ9NX01 149 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 AK3Q9UIJ7 227 aa12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 STUB1Q9UNE7 303 aa12.06□□□□□ -0.48
SNRPA1-210ENST00000560383 LANCL1O43813 399 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 TMEM11P17152 192 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 RAB6AP20340 208 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 REG1BP48304 166 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 MOB3BQ86TA1 216 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 C5orf56Q8N8D9 126 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 OR4F17Q8NGA8 305 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 PTX4Q96A99 478 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 EAF1Q96JC9 268 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 PECRQ9BY49 303 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 C12orf4Q9NQ89 552 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 ABRACLQ9P1F3 81 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 MGAT4AQ9UM21 535 aa12.05□□□□□ -0.48
SNRPA1-210ENST00000560383 PEX14O75381 377 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 RGS11O94810 467 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 LPLP06858 475 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 CD28P10747 220 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 PPP1CCP36873 323 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 HES1Q14469 280 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 HNF4GQ14541 408 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 ARSJQ5FYB0 599 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 TPRA1Q86W33 373 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 HDHD3Q9BSH5 251 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 CHMP1AQ9HD42 196 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 Q9N2K0 584 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 KCNK7Q9Y2U2 307 aa12.04□□□□□ -0.48
SNRPA1-210ENST00000560383 IGHV3-72A0A0B4J1Y9 119 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 NOTOA8MTQ0 251 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 ADARB2-AS1A8MUL3 147 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 RAB27BO00194 218 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 ITGB1BP1O14713 200 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 CD83Q01151 205 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 HIST2H2BDQ6DRA6 164 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 OR2T10Q8NGZ9 312 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 PLSCR3Q9NRY6 295 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 SSR3Q9UNL2 185 aa12.03□□□□□ -0.48
SNRPA1-210ENST00000560383 SH2D7A6NKC9 451 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 ZNF736B4DX44 427 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 HLA-DRB3P79483 266 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 ZNF833PQ6ZTB9 187 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 OR2AK2Q8NG84 335 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 OR5AU1Q8NGC0 362 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 OR8H1Q8NGG4 311 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 OR10R2Q8NGX6 335 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 IL1F10Q8WWZ1 152 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 R3HDM4Q96D70 268 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 RAB3CQ96E17 227 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 OR51E2Q9H255 320 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 IFI27L2Q9H2X8 130 aa12.02□□□□□ -0.49
SNRPA1-210ENST00000560383 A0A0B4J203 849 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 MFNGO00587 321 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 MOSP00540 346 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 IGHG2P01859 326 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 LSAMPQ13449 338 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 NEDD8Q15843 81 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 TCTEX1D4Q5JR98 221 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 FAM71F2Q6NXP2 309 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 CENPVQ7Z7K6 275 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 Q8N9W7 124 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 SETD6Q8TBK2 473 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 KCTD7Q96MP8 289 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 AGMATQ9BSE5 352 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 GHITMQ9H3K2 345 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 SLC23A1Q9UHI7 598 aa12.01□□□□□ -0.49
SNRPA1-210ENST00000560383 NOTCH3Q9UM47 2321 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 METTL21EPA6NDL7 271 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 SERPINE3A8MV23 424 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 SCTP09683 121 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 HIST1H1DP16402 221 aaKnown RBP12□□□□□ -0.49
SNRPA1-210ENST00000560383 CD36P16671 472 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 ZBTB25P24278 435 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 GADD45AP24522 165 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 C9orf152Q5JTZ5 239 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 NABP2Q9BQ15 211 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 ZNF251Q9BRH9 671 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 TOLLIPQ9H0E2 274 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 ABCG5Q9H222 651 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
SNRPA1-210ENST00000560383 LIN7CQ9NUP9 197 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms