RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CD28P10747 220 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 TMEM11P17152 192 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 MYL9P24844 172 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 PSMB9P28065 219 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 PPP1CCP36873 323 aaKnown RBP10.48□□□□□ -0.73
SMAD3-213ENST00000560175 REG1BP48304 166 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 TMEM95Q3KNT9 176 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 MOB3BQ86TA1 216 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 NDUFA11Q86Y39 141 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 TGIF2LXQ8IUE1 241 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 AGMATQ9BSE5 352 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 ABHD14AQ9BUJ0 271 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 TOLLIPQ9H0E2 274 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 GHITMQ9H3K2 345 aa10.48□□□□□ -0.73
SMAD3-213ENST00000560175 NOTOA8MTQ0 251 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 ZNF736B4DX44 427 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-213ENST00000560175 LPLP06858 475 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 CSF1P09603 554 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 MOGAT2Q3SYC2 334 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 FAM71F2Q6NXP2 309 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 ZNF833PQ6ZTB9 187 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 Q8N9W7 124 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 OR8H1Q8NGG4 311 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 ZNF251Q9BRH9 671 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 HDHD3Q9BSH5 251 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-213ENST00000560175 IFI27L2Q9H2X8 130 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 C12orf4Q9NQ89 552 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.47□□□□□ -0.732e-6■■■■■ 41.6
SMAD3-213ENST00000560175 ABRACLQ9P1F3 81 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 SSR3Q9UNL2 185 aa10.47□□□□□ -0.73
SMAD3-213ENST00000560175 IGHV3-72A0A0B4J1Y9 119 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 TRIM64CA6NLI5 447 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 MFNGO00587 321 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 DIRAS3O95661 229 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 MOSP00540 346 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 HES1Q14469 280 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 SRSF7Q16629 238 aaKnown RBP eCLIP10.46□□□□□ -0.732e-9■■■□□ 16.9
SMAD3-213ENST00000560175 HIST2H2BDQ6DRA6 164 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 LYG1Q8N1E2 194 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 RAB3CQ96E17 227 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 CITED2Q99967 270 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-213ENST00000560175 NABP2Q9BQ15 211 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 CMSS1Q9BQ75 279 aaKnown RBP10.46□□□□□ -0.73
SMAD3-213ENST00000560175 ABCG5Q9H222 651 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 OR51E2Q9H255 320 aa10.46□□□□□ -0.73
SMAD3-213ENST00000560175 LIN7CQ9NUP9 197 aaKnown RBP10.46□□□□□ -0.73
SMAD3-213ENST00000560175 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 SH2D7A6NKC9 451 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-213ENST00000560175 PROP1O75360 226 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 OPN1MWP04001 364 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 SCTP09683 121 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 OPN1MW2P0DN77 364 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 OPN1MW3P0DN78 364 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 SLC2A2P11168 524 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-213ENST00000560175 HLA-DRB3P79483 266 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 LSAMPQ13449 338 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 HNF4GQ14541 408 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 Q6ZS49 121 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 CENPVQ7Z7K6 275 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-213ENST00000560175 FAM71E2Q8N5Q1 922 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 OR2AK2Q8NG84 335 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 KCTD7Q96MP8 289 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 CHMP1AQ9HD42 196 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-213ENST00000560175 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 SLC23A1Q9UHI7 598 aa10.45□□□□□ -0.74
SMAD3-213ENST00000560175 NOTCH3Q9UM47 2321 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 SAA2-SAA4A0A096LPE2 208 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 A0A0B4J203 849 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 METTL21EPA6NDL7 271 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 SERPINE3A8MV23 424 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 TRDCB7Z8K6 153 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 RAB29O14966 203 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 PEX14O75381 377 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 SAA2P0DJI9 122 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-213ENST00000560175 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
SMAD3-213ENST00000560175 CD36P16671 472 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 ZBTB25P24278 435 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 F2RL1P55085 397 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 SCAND1P57086 179 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 IL1F10Q8WWZ1 152 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 S1PR3Q99500 378 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 PARP12Q9H0J9 701 aaKnown RBP10.44□□□□□ -0.74
SMAD3-213ENST00000560175 C11orf54Q9H0W9 315 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-213ENST00000560175 ZNF580Q9UK33 172 aa10.44□□□□□ -0.74
SMAD3-213ENST00000560175 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 TMEM127O75204 238 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 GADD45AP24522 165 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 SDC2P34741 201 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 CEACAM6P40199 344 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 OR3A3P47888 321 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 ARL6IP1Q15041 203 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-213ENST00000560175 SFXN4Q6P4A7 337 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 C10orf99Q6UWK7 81 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 WFDC9Q8NEX5 89 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms