RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RSBN1Q5VWQ0 802 aaPredicted RBP7.8□□□□□ -1.16
SPG11-214ENST00000558989 FAM90A2PQ658T7 463 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 ZNF626Q68DY1 528 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 UNQ9370/PRO34162Q6UXP9 181 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 LRRTM1Q86UE6 522 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 ZNF565Q8N9K5 539 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 OR52B4Q8NGK2 314 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 FAM110DQ8TAY7 271 aaPredicted RBP7.8□□□□□ -1.16
SPG11-214ENST00000558989 ABCB10Q9NRK6 738 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 CALYQ9NYX4 217 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 IL36GQ9NZH8 169 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 SIGLEC9Q9Y336 463 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 IGHV3-43A0A0B4J1X8 118 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 ZNF729A6NN14 1252 aaPredicted RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 NPIPB5A8MRT5 1133 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 ODF3BA8MYP8 253 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 TOR1AO14656 332 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 LANCL1O43813 399 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 ZNF780AO75290 641 aaPredicted RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 CSN2P05814 226 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 IGHV3-43DP0DP04 118 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 CD1BP29016 333 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 FABP5Q01469 135 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 MLLT11Q13015 90 aaPredicted RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 GPR176Q14439 515 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 P2RY14Q15391 338 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 CXorf66Q5JRM2 361 aaPredicted RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 GLT8D1Q68CQ7 371 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 FAM53AQ6NSI3 398 aaPredicted RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 CDPF1Q6NVV7 123 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 TMEM91Q6ZNR0 172 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 GDPGP1Q6ZNW5 385 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 Q6ZSV7 163 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 TPRA1Q86W33 373 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 OR11H6Q8NGC7 330 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 OR4F5Q8NH21 305 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 OR4K15Q8NH41 348 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 RRNAD1Q96FB5 475 aaKnown RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 BSCL2Q96G97 398 aaPredicted RBP7.79□□□□□ -1.16
SPG11-214ENST00000558989 Q9H521 79 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 BEX1Q9HBH7 125 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 PLGRKTQ9HBL7 147 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 GAB2Q9UQC2 676 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 PEX16Q9Y5Y5 336 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 ANK2Q01484 3957 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 WNK1Q9H4A3 2382 aa7.79□□□□□ -1.16
SPG11-214ENST00000558989 HELTA6NFD8 242 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 AIPO00170 330 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 CHST1O43916 411 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 RBP4P02753 201 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 HOXB5P09067 269 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 CLDN12P56749 244 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 EMX1Q04741 257 aaPredicted RBP7.78□□□□□ -1.16
SPG11-214ENST00000558989 TPBGQ13641 420 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 OLFML2AQ68BL7 652 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 SLC35E4Q6ICL7 350 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 HEPN1Q6WQI6 88 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 C5orf24Q7Z6I8 188 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 OR4P4Q8NGL7 312 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 OR5R1Q8NH85 324 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 KIRREL1Q96J84 757 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 MEGF9Q9H1U4 602 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 ACOT13Q9NPJ3 140 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 ETAA1Q9NY74 926 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 TBL2Q9Y4P3 447 aaKnown RBP7.78□□□□□ -1.16
SPG11-214ENST00000558989 RNF114Q9Y508 228 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 TMEM30CPA0ZSE6 113 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 CLPSL1A2RUU4 121 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 MCRIP1C9JLW8 97 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 UCHL1P09936 223 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 PSMB9P28065 219 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 HTR1DP28221 377 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 HTR2CP28335 458 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 SSX1Q16384 188 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 MPV17LQ2QL34 196 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 OR52W1Q6IF63 320 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 ZNF367Q7RTV3 350 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 C11orf44Q8N8P7 122 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 LINC01006Q8NI28 216 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 PIFOQ8TCI5 191 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 ARL11Q969Q4 196 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 MALSU1Q96EH3 234 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 GFI1Q99684 422 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 NICN1Q9BSH3 213 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 ZNF747Q9BV97 191 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 IDI2-AS1Q9NZ38 188 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 TRAPPC2LQ9UL33 140 aa7.78□□□□□ -1.16
SPG11-214ENST00000558989 TET2Q6N021 2002 aaPredicted RBP7.77□□□□□ -1.17
SPG11-214ENST00000558989 SC5DO75845 299 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 VSIG8P0DPA2 414 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 KRTAP10-3P60369 221 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 NHLRC3Q5JS37 347 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 SYT6Q5T7P8 510 aaPredicted RBP7.77□□□□□ -1.17
SPG11-214ENST00000558989 HES5Q5TA89 166 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 LYPD6Q86Y78 171 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 BPIFCQ8NFQ6 507 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 CST11Q9H112 138 aa7.77□□□□□ -1.17
SPG11-214ENST00000558989 PEF1Q9UBV8 284 aaKnown RBP7.77□□□□□ -1.17
SPG11-214ENST00000558989 DENRO43583 198 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms