RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZNF736B4DX44 427 aaPredicted RBP5.77□□□□□ -1.49
SPG11-213ENST00000558988 NPIPB11E5RHQ5 1161 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 K7EIL1 84 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 MYL12BO14950 172 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 OGG1O15527 345 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 SPINT2O43291 252 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 MT-ND4P03905 459 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 SLC2A2P11168 524 aaPredicted RBP5.77□□□□□ -1.49
SPG11-213ENST00000558988 CELP19835 753 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 GZMHP20718 246 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 MYF6P23409 242 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 IL3RAP26951 378 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 RCN1Q15293 331 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 MPV17LQ2QL34 196 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 DEFB136Q30KP8 78 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 Q499Y3 187 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 SYT6Q5T7P8 510 aaPredicted RBP5.77□□□□□ -1.49
SPG11-213ENST00000558988 DMKNQ6E0U4 476 aaPredicted RBP5.77□□□□□ -1.49
SPG11-213ENST00000558988 ASCL4Q6XD76 172 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 OR2W3Q7Z3T1 314 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 C5orf24Q7Z6I8 188 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 FOXRED2Q8IWF2 684 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 BPIFB6Q8NFQ5 453 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 CHPT1Q8WUD6 406 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 TFAP2CQ92754 450 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 GGHQ92820 318 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 IL36GQ9NZH8 169 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 PEX16Q9Y5Y5 336 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 TRBV5-5A0A0J9YX44 114 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A18PA6NE21 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A16PA6NEW6 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A20PA6NIJ5 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A9PA6NNJ1 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A12PA8MX19 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A5PA8MXJ8 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 C12orf77C9JDV5 145 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 ANKRD65E5RJM6 399 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 C15orf65H3BRN8 121 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 ZNF780AO75290 641 aaPredicted RBP5.76□□□□□ -1.49
SPG11-213ENST00000558988 HBZP02008 142 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 GNAO1P09471 354 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A15PP0C7V4 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A13PP0C7W8 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A14PP0C7W9 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 FAM90A24PP0C7X0 464 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 MGMTP16455 207 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 IGFBP3P17936 291 aaPredicted RBP5.76□□□□□ -1.49
SPG11-213ENST00000558988 RCC1P18754 421 aaPredicted RBP5.76□□□□□ -1.49
SPG11-213ENST00000558988 GPR12P47775 334 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 RPS11P62280 158 aaKnown RBP eCLIP5.76□□□□□ -1.49
SPG11-213ENST00000558988 GPR176Q14439 515 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 INSL4Q14641 139 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 GNMTQ14749 295 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 YIF1BQ5BJH7 314 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 TTC23Q5W5X9 447 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 C11orf87Q6NUJ2 197 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 ZNF497Q6ZNH5 498 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 LINC00596Q86U02 117 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 TGIF2LXQ8IUE1 241 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 C8orf59Q8N0T1 100 aaPredicted RBP5.76□□□□□ -1.49
SPG11-213ENST00000558988 STPG2Q8N412 459 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 TMEM104Q8NE00 496 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 OR10A7Q8NGE5 316 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 OR52L2PQ8NGH6 319 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 OR2T10Q8NGZ9 312 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 SETD6Q8TBK2 473 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 RTN4IP1Q8WWV3 396 aaPredicted RBP5.76□□□□□ -1.49
SPG11-213ENST00000558988 PGLYRP3Q96LB9 341 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 RDH12Q96NR8 316 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 RASL11BQ9BPW5 248 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 TMED9Q9BVK6 235 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 KCNK15Q9H427 330 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 NCOR1P1Q9H4R4 102 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 KCNIP1Q9NZI2 227 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
SPG11-213ENST00000558988 TRBV5-7A0A0A0MS05 114 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 EFCAB10A6NFE3 127 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 AP4M1O00189 453 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 FGF16O43320 207 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 ORC5O43913 435 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 DUS4LO95620 317 aaKnown RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 MOSP00540 346 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 EGR2P11161 476 aaPredicted RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 PPP1CCP36873 323 aaKnown RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 CAPGP40121 348 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 THBS3P49746 956 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 LUMP51884 338 aaPredicted RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 WNT4P56705 351 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 TAS2R43P59537 309 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 ADARB1P78563 741 aaKnown RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 GABPB1Q06547 395 aaPredicted RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 ZNF816Q0VGE8 651 aaPredicted RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 GPR50Q13585 617 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 MMDQ15546 238 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 CXorf66Q5JRM2 361 aaPredicted RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 NHLRC3Q5JS37 347 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 RBM48Q5RL73 367 aaKnown RBP5.75□□□□□ -1.49
SPG11-213ENST00000558988 C6orf183Q5T699 404 aa5.75□□□□□ -1.49
SPG11-213ENST00000558988 FAM27D1Q5T7N8 215 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms