RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CMBLQ96DG6 245 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 FANCD2OSQ96PS1 177 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 HIST1H2AAQ96QV6 131 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 C2orf88Q9BSF0 95 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 MRI1Q9BV20 369 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 CHST6Q9GZX3 395 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 PBOV1Q9GZY1 135 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 C20orf85Q9H1P6 137 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 OR10A2Q9H208 303 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 DPAGT1Q9H3H5 408 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 RHOFQ9HBH0 211 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 DNAJC4Q9NNZ3 241 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 GSKIPQ9P0R6 139 aa3.44□□□□□ -1.86
ZEB1-212ENST00000558655 TMEM269A0A1B0GVZ9 245 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TMEM213A2RRL7 107 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ADARB2-AS1A8MUL3 147 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 IQCF6A8MYZ5 107 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 SHISA9B4DS77 424 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 H0Y980 276 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 RAMP3O60896 148 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 IFNA21P01568 189 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ALDOBP05062 364 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 PATE4P0C8F1 98 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ANXA3P12429 323 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 SELEP16581 610 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 IER3P46695 156 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 PTH2RP49190 550 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 RAB13P51153 203 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 RANP62826 216 aaKnown RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 KLF9Q13886 244 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 C9orf135Q5VTT2 229 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 RBMS3Q6XE24 437 aaKnown RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 DOK3Q7L591 496 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TMEM144Q7Z5S9 345 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 Q8N1Y9 231 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 PAQR4Q8N4S7 273 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 OR2T35Q8NGX2 323 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 OR14K1Q8NGZ2 314 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 OR52E5Q8NH55 327 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 LYZL4Q96KX0 146 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ESRP2Q9H6T0 727 aaKnown RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 CDH20Q9HBT6 801 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 CDC42EP3Q9UKI2 254 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 V9GY05 133 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 PRR14LQ5THK1 2151 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TRAV18A0A075B6X5 111 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 PRSS46E5RG02 174 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 C19orf84I3L1E1 186 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 CRLF1O75462 422 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 MPC2O95563 127 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 IGHV3-13P01766 116 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 C1QBP02746 253 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 DBHP09172 617 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 PAX1P15863 534 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 IGFBP3P17936 291 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 IDH3GP51553 393 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TAS2R20P59543 309 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 SSBP2P81877 361 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 FAM3AP98173 230 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TLE4Q04727 773 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 GAGE1Q13065 139 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 RAB31Q13636 194 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 NKPD1Q17RQ9 610 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 LGALSLQ3ZCW2 172 aaPredicted RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 LINC01620Q4KN68 170 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 GLYATL3Q5SZD4 288 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 BTNL3Q6UXE8 466 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 C8orf86Q6ZUL3 223 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TGIF2LXQ8IUE1 241 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TCTE3Q8IZS6 198 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF283Q8N7M2 679 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 BOLLQ8N9W6 283 aaKnown RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 OR4S1Q8NGB4 309 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 RNASEH2CQ8TDP1 164 aaKnown RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ACOT12Q8WYK0 555 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 MSI2Q96DH6 328 aaKnown RBP3.43□□□□□ -1.86
ZEB1-212ENST00000558655 AJUBAQ96IF1 538 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 Q96M66 194 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TMEM56Q96MV1 263 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TAS2R4Q9NYW5 299 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF319Q9P2F9 582 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 HHLA2Q9UM44 414 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TMEM56-RWDD3S4R434 201 aa3.43□□□□□ -1.86
ZEB1-212ENST00000558655 TRAV1-2A0A0B4J238 106 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PQLC2LA1A4F0 135 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 C5orf49A4QMS7 147 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 C5orf63A6NC05 138 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 USP17L23D6RBM5 183 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 G3V3Q6 166 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 AIPO00170 330 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 EIF3GO75821 320 aaKnown RBP eCLIP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 DHRS3O75911 302 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ARL6IP5O75915 188 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 TOX4O94842 621 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 CRYAAP02489 173 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 CD55P08174 381 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 VSIG10L2P0DP72 767 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ERP29P30040 261 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms