RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ONECUT1Q9UBC0 465 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 C14orf166Q9Y224 244 aaKnown RBP12.2□□□□□ -0.46
VPS18-202ENST00000558474 INSIG2Q9Y5U4 225 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 IGHV3-43A0A0B4J1X8 118 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 MEX3AA1L020 520 aaKnown RBP12.19□□□□□ -0.46
VPS18-202ENST00000558474 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 PEX14O75381 377 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 MMP23AO75900 390 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 IGHV3-43DP0DP04 118 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 PGAM2P15259 253 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 NFYBP25208 207 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 S100GP29377 79 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 FXYD4P59646 89 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 GNMTQ14749 295 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 METTL11BQ5VVY1 283 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 C11orf88Q6PI97 169 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 SLC25A48Q6ZT89 311 aaKnown RBP12.19□□□□□ -0.46
VPS18-202ENST00000558474 ZNF645Q8N7E2 425 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.19□□□□□ -0.46
VPS18-202ENST00000558474 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 UPRTQ96BW1 309 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 AGMATQ9BSE5 352 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 ABHD14AQ9BUJ0 271 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 SLC5A7Q9GZV3 580 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 HEXA-AS1Q9H8Q6 139 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 VSIG4Q9Y279 399 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 RBM7Q9Y580 266 aaKnown RBP12.19□□□□□ -0.46
VPS18-202ENST00000558474 YLPM1P49750 1951 aaKnown RBP12.19□□□□□ -0.46
VPS18-202ENST00000558474 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
VPS18-202ENST00000558474 NBPF19A0A087WUL8 3843 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 GPR31O00270 319 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
VPS18-202ENST00000558474 IL5P05113 134 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 SPNP16150 400 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 GNRHRP30968 328 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 GZMKP49863 264 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 PRRX1P54821 245 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 RND3P61587 244 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 ARF6P62330 175 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 PAX8Q06710 450 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 LTC4SQ16873 150 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 NCR3LG1Q68D85 454 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 Q6ZNX1 250 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 CMTM1Q8IZ96 169 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 Q8N7P7 452 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 CCDC71LQ8N9Z2 235 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 BVESQ8NE79 360 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 SECTM1Q8WVN6 248 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 TOMM40LQ969M1 308 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 SIRPDQ9H106 197 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 MMP28Q9H239 520 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 C5orf66Q9H5L9 145 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
VPS18-202ENST00000558474 PDZD2O15018 2839 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 ABCA12Q86UK0 2595 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 IGKV1D-13A0A0B4J2D9 117 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 J3QR06 171 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 RLN1P04808 185 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 OR8U9P0C7N5 309 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 IGKV1-13P0DP09 117 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 DHODHQ02127 395 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 ABCA11PQ4W5N1 156 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 GLCCI1Q86VQ1 547 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 ABHD12Q8N2K0 398 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 BEND2Q8NDZ0 799 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 OR11H6Q8NGC7 330 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 OR8U1Q8NH10 309 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 RTBDNQ9BSG5 229 aaPredicted RBP12.17□□□□□ -0.46
VPS18-202ENST00000558474 SUCNR1Q9BXA5 334 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 MMP26Q9NRE1 261 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 ZNF221Q9UK13 617 aa12.17□□□□□ -0.46
VPS18-202ENST00000558474 NAV2Q8IVL1 2488 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 IGHV2-26A0A0B4J1V2 119 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 J3QLI3 93 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 TOR1AO14656 332 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 RAB29O14966 203 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 TOX4O94842 621 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 MMP9P14780 707 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 ZNF134P52741 427 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 CT45A1Q5HYN5 189 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 CT45A3Q8NHU0 189 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 TMEM186Q96B77 213 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
VPS18-202ENST00000558474 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
VPS18-202ENST00000558474 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.46
VPS18-202ENST00000558474 IGLV1-47P01700 117 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 OR4E1P0C645 316 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 IL3RAP26951 378 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 GPR12P47775 334 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 ZNF137PP52743 207 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms