RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 GSTP1P09211 210 aaKnown RBP9.92□□□□□ -0.82
SMAD3-205ENST00000558428 REG1BP48304 166 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 ZNF816Q0VGE8 651 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-205ENST00000558428 ZNF260Q3ZCT1 412 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 LY6G6FQ5SQ64 297 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 HACD4Q5VWC8 232 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 MOB3BQ86TA1 216 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 IZUMO1Q8IYV9 350 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 LYG1Q8N1E2 194 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 DRAM1Q8N682 238 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 OR2AK2Q8NG84 335 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 CAPSLQ8WWF8 208 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 OR1A1Q9P1Q5 309 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 ZNF230Q9UIE0 474 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-205ENST00000558428 TRAV18A0A075B6X5 111 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 A0A0A6YYH2 397 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 IGHV1-3A0A0C4DH29 117 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 CLPSL1A2RUU4 121 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 A6NJ64 397 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 FABP7O15540 132 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 TSPAN9O75954 239 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 LPLP06858 475 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 ZBTB25P24278 435 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 CEACAM6P40199 344 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 KIR2DS4P43632 304 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 RPL5P46777 297 aaKnown RBP9.91□□□□□ -0.82
SMAD3-205ENST00000558428 ZNF137PP52743 207 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 GNG2P59768 71 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 PITPNAQ00169 270 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 KIR2DS1Q14954 304 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 CLVS1Q8IUQ0 354 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-205ENST00000558428 SAMD12Q8N8I0 201 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 OR4A4PQ8NGN8 299 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 OR4C13Q8NGP0 309 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 NUDCD2Q8WVJ2 157 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 RTN4IP1Q8WWV3 396 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-205ENST00000558428 CFHR4Q92496 578 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 ST6GALNAC6Q969X2 333 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 KCTD12Q96CX2 325 aaKnown RBP9.91□□□□□ -0.82
SMAD3-205ENST00000558428 NPFFR1Q9GZQ6 430 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 DCSTAMPQ9H295 470 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 DIABLOQ9NR28 239 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 MMP24Q9Y5R2 645 aa9.91□□□□□ -0.82
SMAD3-205ENST00000558428 IGHV3-72A0A0B4J1Y9 119 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 IGKV1-6A0A0C4DH72 117 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 FAM90A9PA6NNJ1 464 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 BET1O15155 118 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 ST8SIA5O15466 376 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 SNRNP70P08621 437 aaKnown RBP9.9□□□□□ -0.82
SMAD3-205ENST00000558428 GSTT2P0CG29 244 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 GSTT2BP0CG30 244 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 FAM106CPP0CH98 169 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 DTYMKP23919 212 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 RORCP51449 518 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 HES1Q14469 280 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 HERPUD1Q15011 391 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 PNLIPRP3Q17RR3 467 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 FBLN7Q53RD9 439 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 C16orf82Q7Z2V1 217 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 THNSL2Q86YJ6 484 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 TGIF2LXQ8IUE1 241 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 LINC01006Q8NI28 216 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 EDARADDQ8WWZ3 215 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 S100A16Q96FQ6 103 aaKnown RBP9.9□□□□□ -0.82
SMAD3-205ENST00000558428 AKR1E2Q96JD6 320 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 SLC25A33Q9BSK2 321 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 ST6GALNAC5Q9BVH7 336 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 PARP12Q9H0J9 701 aaKnown RBP9.9□□□□□ -0.82
SMAD3-205ENST00000558428 ABCG5Q9H222 651 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 C16orf95Q9H693 158 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 RANBP3Q9H6Z4 567 aaPredicted RBP9.9□□□□□ -0.82
SMAD3-205ENST00000558428 COMMD3Q9UBI1 195 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 SCOCQ9UIL1 159 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 RNF114Q9Y508 228 aa9.9□□□□□ -0.82
SMAD3-205ENST00000558428 TXNL1O43396 289 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 LANCL1O43813 399 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 OR2F2O95006 317 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 IGKV1D-33P01593 117 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 IGKV1-33P01594 117 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 SRSF7Q16629 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMAD3-205ENST00000558428 IGSF11Q5DX21 431 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 Q6ZS49 121 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 ODF3L1Q8IXM7 274 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 DTX3Q8N9I9 347 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 RAB2BQ8WUD1 216 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 ACOT12Q8WYK0 555 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 RBM14Q96PK6 669 aaKnown RBP9.89□□□□□ -0.83
SMAD3-205ENST00000558428 CABLES2Q9BTV7 478 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 IFI27L2Q9H2X8 130 aa9.89□□□□□ -0.83
SMAD3-205ENST00000558428 IGKV1D-8A0A087WSZ0 117 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 SAA2-SAA4A0A096LPE2 208 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 HAX1O00165 279 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 ITGB1BP1O14713 200 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 RAB29O14966 203 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 XRCC3O43542 346 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 SSX5O60225 188 aa9.88□□□□□ -0.83
SMAD3-205ENST00000558428 NOL3O60936 208 aaKnown RBP9.88□□□□□ -0.83
SMAD3-205ENST00000558428 SAA2P0DJI9 122 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms