RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ARHGAP5-AS1Q96IT6 56 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 CHCHD6Q9BRQ6 235 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 SLC25A33Q9BSK2 321 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 OR51E2Q9H255 320 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 Q9N2K0 584 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 C12orf4Q9NQ89 552 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 PIPOXQ9P0Z9 390 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 AK3Q9UIJ7 227 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 LOC100506127A0A0U1RQW1 187 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 A0A1W2PPI3 338 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 TRDCB7Z8K6 153 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 RAB27BO00194 218 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 HSPA12AO43301 675 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 FGF16O43320 207 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 LANCL1O43813 399 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 DIRAS3O95661 229 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 TMEM11P17152 192 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 CD24P25063 80 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 TALDO1P37837 337 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 SERPINB10P48595 397 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 ZNF134P52741 427 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 PITPNAQ00169 270 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 KIR2DS1Q14954 304 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 SRSF7Q16629 238 aaKnown RBP eCLIP6.78□□□□□ -1.32
TPM1-213ENST00000558400 PLAC9Q5JTB6 97 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 SFXN4Q6P4A7 337 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 LYG1Q8N1E2 194 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 OR2AK2Q8NG84 335 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 OR52L2PQ8NGH6 319 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 OR10V1Q8NGI7 309 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 OR56B4Q8NH76 319 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 UBALD1Q8TB05 177 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 RTN4IP1Q8WWV3 396 aaPredicted RBP6.78□□□□□ -1.32
TPM1-213ENST00000558400 IL1F10Q8WWZ1 152 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 S1PR3Q99500 378 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 ABHD14AQ9BUJ0 271 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 ATG5Q9H1Y0 275 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 KCNK15Q9H427 330 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 ZNF702PQ9H963 129 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 SERTAD4Q9NUC0 356 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 DAPK2Q9UIK4 370 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 MOB4Q9Y3A3 225 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 TENM1Q9UKZ4 2725 aa6.78□□□□□ -1.32
TPM1-213ENST00000558400 A0A0A6YYH2 397 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 A6NJ64 397 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 TRIM64CA6NLI5 447 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 RAB29O14966 203 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 AIREO43918 545 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 MOSP00540 346 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 IGKV1D-33P01593 117 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 IGKV1-33P01594 117 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 SNRNP70P08621 437 aaKnown RBP6.77□□□□□ -1.33
TPM1-213ENST00000558400 VSIG10L2P0DP72 767 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 SLC2A2P11168 524 aaPredicted RBP6.77□□□□□ -1.33
TPM1-213ENST00000558400 HIST1H1DP16402 221 aaKnown RBP6.77□□□□□ -1.33
TPM1-213ENST00000558400 PPP1CCP36873 323 aaKnown RBP6.77□□□□□ -1.33
TPM1-213ENST00000558400 CEACAM6P40199 344 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 VDAC2P45880 294 aaPredicted RBP6.77□□□□□ -1.33
TPM1-213ENST00000558400 ARFRP1Q13795 201 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 DIAPH2-AS1Q14236 149 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 CDNFQ49AH0 187 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 ABCA11PQ4W5N1 156 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 FAM71F2Q6NXP2 309 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 CENPVQ7Z7K6 275 aaPredicted RBP6.77□□□□□ -1.33
TPM1-213ENST00000558400 NR2C2APQ86WQ0 139 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 IZUMO1Q8IYV9 350 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 OR4A4PQ8NGN8 299 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 CFHR4Q92496 578 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.77□□□□□ -1.33
TPM1-213ENST00000558400 SLC23A1Q9UHI7 598 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 KCNK7Q9Y2U2 307 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 SIGLEC9Q9Y336 463 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 ETV7Q9Y603 341 aa6.77□□□□□ -1.33
TPM1-213ENST00000558400 TRRAPQ9Y4A5 3859 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 NCBP2LA6PVI3 153 aaKnown RBP6.76□□□□□ -1.33
TPM1-213ENST00000558400 MFNGO00587 321 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 SLC31A2O15432 143 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
TPM1-213ENST00000558400 CTXN2P0C2S0 81 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 GNB3P16520 340 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 DTYMKP23919 212 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 MC5RP33032 325 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 REG1BP48304 166 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 KRTAP10-3P60369 221 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 HLA-DRB3P79483 266 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 DEFA6Q01524 100 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 MXD1Q05195 221 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 SRSF4Q08170 494 aaKnown RBP6.76□□□□□ -1.33
TPM1-213ENST00000558400 HNF4GQ14541 408 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 PNLIPRP3Q17RR3 467 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 C2orf68Q2NKX9 166 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 IDNKQ5T6J7 187 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 Q6ZS49 121 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 KLHDC1Q8N7A1 406 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
TPM1-213ENST00000558400 GON7Q9BXV9 100 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 WNT10AQ9GZT5 417 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 DCSTAMPQ9H295 470 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms