RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 AADACP22760 399 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 TFPI2P48307 235 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 UBE2G2P60604 165 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 HERV-K104P61576 105 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 MRPS34P82930 218 aaKnown RBP9.32□□□□□ -0.92
USP3-206ENST00000558157 FOXL1Q12952 345 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 LCN15Q6UWW0 184 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 TMEM144Q7Z5S9 345 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 TMEM217Q8N7C4 229 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF738Q8NE65 137 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 IL22RA2Q969J5 263 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 IMMP1LQ96LU5 166 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ALKBH3Q96Q83 286 aaPredicted RBP9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF552Q9H707 407 aaPredicted RBP9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF286AQ9HBT8 521 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF160Q9HCG1 818 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ARID1AO14497 2285 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 C21orf140B9A014 251 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ZFAND5O76080 213 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 NDUFB8O95169 186 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 TMEM11P17152 192 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 IL3RAP26951 378 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 PSMB3P49720 205 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF121P58317 390 aaPredicted RBP9.32□□□□□ -0.92
USP3-206ENST00000558157 FXYD4P59646 89 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF154Q13106 437 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 CRIP3Q6Q6R5 217 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 MEX3BQ6ZN04 569 aaKnown RBP9.32□□□□□ -0.92
USP3-206ENST00000558157 Q6ZWC4 215 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 C1QL2Q7Z5L3 287 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 FAM71F1Q96KD3 344 aaPredicted RBP9.32□□□□□ -0.92
USP3-206ENST00000558157 SIGLEC12Q96PQ1 595 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 RNF2Q99496 336 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 MANBALQ9NQG1 85 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 KLHL13Q9P2N7 655 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 HSPB7Q9UBY9 170 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 YPEL3P61236 119 aaPredicted RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 PPP1CBP62140 327 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 PRSS8Q16651 343 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 NMSQ5H8A3 153 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 CST9LP1Q5W188 147 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 ETFRF1Q6IPR1 90 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 CYYR1Q96J86 154 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 RAB40CQ96S21 281 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 DEFB126Q9BYW3 111 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 PARLQ9H300 379 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 CHODLQ9H9P2 273 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 ZNF319Q9P2F9 582 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 RNF115Q9Y4L5 304 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 AHCTF1Q8WYP5 2266 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 ALG1L2C9J202 215 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 MS4A18H0YCH9 400 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 TMEM50AO95807 157 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 SLC25A6P12236 298 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 BMP5P22003 454 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 GCH1P30793 250 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 GRB2P62993 217 aaKnown RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 RSPO4Q2I0M5 234 aaPredicted RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 MS4A18Q3C1V0 323 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 CXorf66Q5JRM2 361 aaPredicted RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 SELENOHQ8IZQ5 122 aaKnown RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 OR5AU1Q8NGC0 362 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 OR56B2PQ8NGI1 322 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 LAMTOR2Q9Y2Q5 125 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 UBE2J1Q9Y385 318 aaPredicted RBP9.31□□□□□ -0.92
USP3-206ENST00000558157 COX11Q9Y6N1 276 aa9.31□□□□□ -0.92
USP3-206ENST00000558157 IGKV1D-43A0A0B4J1Z2 117 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 IGHV2-70DA0A0C4DH43 119 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 FAM166BA8MTA8 275 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 HS3ST1O14792 307 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 ADAM20O43506 726 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 CHST1O43916 411 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 NUDT14O95848 222 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 IGLV3-1P01715 115 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 GYPAP02724 150 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 HLA-DOBP13765 273 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 CEACAM8P31997 349 aaPredicted RBP9.3□□□□□ -0.92
USP3-206ENST00000558157 CTRLP40313 264 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 FAM57BQ71RH2 274 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 H1FNTQ75WM6 255 aaPredicted RBP9.3□□□□□ -0.92
USP3-206ENST00000558157 NUDT10Q8NFP7 164 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
USP3-206ENST00000558157 KLHDC3Q9BQ90 382 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 HDHD3Q9BSH5 251 aaPredicted RBP9.3□□□□□ -0.92
USP3-206ENST00000558157 TRAV9-1A0A075B6T8 112 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 OR2J2O76002 312 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 CTSSP25774 331 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 PAX9P55771 341 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 FBXW4P57775 412 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 MMDQ15546 238 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 TDRG1Q3Y452 100 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 Q6ZSR3 168 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 DTX1Q86Y01 620 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 LYG1Q8N1E2 194 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 STPG4Q8N801 248 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms