RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 C9orf152Q5JTZ5 239 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 TGIF2LXQ8IUE1 241 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 LYG1Q8N1E2 194 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 OR2AK2Q8NG84 335 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 RAB3CQ96E17 227 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 CMSS1Q9BQ75 279 aaKnown RBP11.07□□□□□ -0.64
VPS33B-206ENST00000557358 ABHD14AQ9BUJ0 271 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 KCNK15Q9H427 330 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 C12orf4Q9NQ89 552 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 IGHV1-3A0A0C4DH29 117 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 TMEM272A0A1B0GTI8 110 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 A0A1W2PPI3 338 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 SOCS1O15524 211 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 YPEL1O60688 119 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 FBXO24O75426 580 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 SCGNO76038 276 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 IGKV1D-33P01593 117 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 IGKV1-33P01594 117 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 CSF1P09603 554 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 ZNF182P17025 639 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-206ENST00000557358 RAB6AP20340 208 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 SRSF4Q08170 494 aaKnown RBP11.06□□□□□ -0.64
VPS33B-206ENST00000557358 HMGN3Q15651 99 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 ABCA11PQ4W5N1 156 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 MORN2Q502X0 79 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 SLC25A48Q6ZT89 311 aaKnown RBP11.06□□□□□ -0.64
VPS33B-206ENST00000557358 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-206ENST00000557358 OR2T10Q8NGZ9 312 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 PHF21AQ96BD5 680 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 YPEL2Q96QA6 119 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 MMP27Q9H306 513 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 FBN3Q75N90 2809 aa11.06□□□□□ -0.64
VPS33B-206ENST00000557358 TRBV6-6A0A0A6YYG2 114 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 TMEM127O75204 238 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 NAPSAO96009 420 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 ZBTB25P24278 435 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 CD1BP29016 333 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 TALDO1P37837 337 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 REG1BP48304 166 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 BLCAPP62952 87 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 HNF4GQ14541 408 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 LY6G6FQ5SQ64 297 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 RTN4IP1Q8WWV3 396 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-206ENST00000557358 EDARADDQ8WWZ3 215 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 PTX4Q96A99 478 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 ARHGAP5-AS1Q96IT6 56 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 GHITMQ9H3K2 345 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 AK3Q9UIJ7 227 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 DAPK2Q9UIK4 370 aa11.05□□□□□ -0.64
VPS33B-206ENST00000557358 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 NCBP2LA6PVI3 153 aaKnown RBP11.04□□□□□ -0.64
VPS33B-206ENST00000557358 SERPINE3A8MV23 424 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 FGF16O43320 207 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 LANCL1O43813 399 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 MOSP00540 346 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 SLC2A2P11168 524 aaPredicted RBP11.04□□□□□ -0.64
VPS33B-206ENST00000557358 PPP1CCP36873 323 aaKnown RBP11.04□□□□□ -0.64
VPS33B-206ENST00000557358 ARFRP1Q13795 201 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 CT45A1Q5HYN5 189 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 UTF1Q5T230 341 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 IDNKQ5T6J7 187 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 IZUMO1Q8IYV9 350 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 OR8H1Q8NGG4 311 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 OR52L2PQ8NGH6 319 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 OR10R2Q8NGX6 335 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 CT45A3Q8NHU0 189 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 AP3S1Q92572 193 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
VPS33B-206ENST00000557358 S1PR3Q99500 378 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 PECRQ9BY49 303 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 ATG5Q9H1Y0 275 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 SERTAD4Q9NUC0 356 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 PTTG2Q9NZH5 202 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 PIPOXQ9P0Z9 390 aa11.04□□□□□ -0.64
VPS33B-206ENST00000557358 A0A0A6YYD4 124 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 OPN1MWP04001 364 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 OPN1MW2P0DN77 364 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 OPN1MW3P0DN78 364 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 ZNF137PP52743 207 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 HLA-DRB3P79483 266 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 HABP2Q14520 560 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-206ENST00000557358 KIR2DS1Q14954 304 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 C11orf44Q8N8P7 122 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 ZNF439Q8NDP4 499 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 OR4X2Q8NGF9 303 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 CFHR4Q92496 578 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
VPS33B-206ENST00000557358 SLC23A1Q9UHI7 598 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 WNK1Q9H4A3 2382 aa11.03□□□□□ -0.64
VPS33B-206ENST00000557358 A0A075B6Q4 140 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 RAB29O14966 203 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 LDLRAD4O15165 306 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 SLC31A2O15432 143 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 SNRPBP14678 240 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms