RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 FAM90A7PA6NKC0 464 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 FAM90A23PA8MXZ1 464 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 SAP30O75446 220 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 MGMTP16455 207 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 NDPQ00604 133 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 YIF1BQ5BJH7 314 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 C19orf54Q5BKX5 351 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 SIGIRRQ6IA17 410 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 ZNF833PQ6ZTB9 187 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 ZFP41Q8N8Y5 198 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 Q96M66 194 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 OR14A2Q96R54 314 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 KCNIP1Q9NZI2 227 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 CLEC2DQ9UHP7 191 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 DIMT1Q9UNQ2 313 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 DNAH1Q9P2D7 4330 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 SAA2-SAA4A0A096LPE2 208 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 SOX15O60248 233 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 CRTAPO75718 401 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 FRMD6-AS1P0C7T7 363 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 SAA2P0DJI9 122 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 SPNP16150 400 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 MYL12AP19105 171 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 FUT3P21217 361 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 OR3A3P47888 321 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 SLURP1P55000 103 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 GABPB1Q06547 395 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 ECSCRQ19T08 205 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 ZNF554Q86TJ5 538 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 NPBQ8NG41 125 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 MRPL30Q8TCC3 161 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 DLX4Q92988 240 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 CHCHD3Q9NX63 227 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 EXOSC1Q9Y3B2 195 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 FBXO7Q9Y3I1 522 aa14.15□□□□□ -0.14
VIPAS39-209ENST00000556909 STARD9Q9P2P6 4700 aa14.15□□□□□ -0.15
VIPAS39-209ENST00000556909 A0A1W2PPK0 400 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 IRGMA1A4Y4 181 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 NDUFA3O95167 84 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 GLAP06280 429 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 GP9P14770 177 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 HTD2P86397 168 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 LIN54Q6MZP7 749 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 LYPD6Q86Y78 171 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 ZNF485Q8NCK3 441 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 TOLLIPQ9H0E2 274 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 CST11Q9H112 138 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 KIAA1456Q9P272 454 aa14.14□□□□□ -0.15
VIPAS39-209ENST00000556909 A0A1W2PN81 502 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 LINC01619G3V211 115 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 YPEL1O60688 119 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 PDCD6O75340 191 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 MAS1P04201 325 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 CHRNA7P36544 502 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 CRIP2P52943 208 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 LY6G6FQ5SQ64 297 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 C6orf141Q5SZD1 244 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 CDH26Q8IXH8 852 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 CASTOR1Q8WTX7 329 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 YPEL2Q96QA6 119 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 IFI27L2Q9H2X8 130 aa14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 FOXA2Q9Y261 457 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-209ENST00000556909 IGHV4OR15-8A0A075B7B6 117 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 A0A087WW49 117 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 TRIM64CA6NLI5 447 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 RGS11O94810 467 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 LGALS1P09382 135 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 FAM71F2Q6NXP2 309 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 ACSM6Q6P461 480 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 FAM131AQ6UXB0 335 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 PQLC1Q8N2U9 271 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 ZNF555Q8NEP9 628 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 OR2AK2Q8NG84 335 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 OR6Q1Q8NGQ2 317 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 ARPC1AQ92747 370 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 FAM46BQ96A09 425 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 DERL3Q96Q80 235 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 S100A14Q9HCY8 104 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 TPSG1Q9NRR2 321 aa14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 EPPK1P58107 5090 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-209ENST00000556909 PNMA8CA0A1B0GUJ8 204 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 LYL1P12980 280 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 CAPGP40121 348 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 HMGN3Q15651 99 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 ZNF660Q6AZW8 331 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 TCTEX1D1Q8N7M0 179 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 GALMQ96C23 342 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 TMEM80Q96HE8 168 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 GHITMQ9H3K2 345 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 FBXL15Q9H469 300 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 ZMAT4Q9H898 229 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 SMPD3Q9NY59 655 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 ERGIC3Q9Y282 383 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 A3GALT2U3KPV4 340 aa14.11□□□□□ -0.15
VIPAS39-209ENST00000556909 RRHO14718 337 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 BAG2O95816 211 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 OR8U9P0C7N5 309 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 CX3CL1P78423 397 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 DOC2BQ14184 412 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms