RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 RAB6AP20340 208 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 INPP1P49441 399 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 VEGFCP49767 419 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 PRRX1P54821 245 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 LOXL3P58215 753 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 ZNF45Q02386 682 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 RAB12Q6IQ22 244 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 CCDC190Q86UF4 302 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 SNX29P2Q8IUI4 249 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 UBALD1Q8TB05 177 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 SLC25A38Q96DW6 304 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 CMTM3Q96MX0 182 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 RBM14Q96PK6 669 aaKnown RBP8.24□□□□□ -1.09
SHMT2-224ENST00000556737 SLC25A33Q9BSK2 321 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 SPACA1Q9HBV2 294 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-224ENST00000556737 TRAV18A0A075B6X5 111 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 A0A1W2PPE3 182 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-224ENST00000556737 TMEM14DPA8MWL7 114 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 C12orf77C9JDV5 145 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 SDCBPO00560 298 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-224ENST00000556737 ORC5O43913 435 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 FBXO24O75426 580 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 SNRNP70P08621 437 aaKnown RBP8.23□□□□□ -1.09
SHMT2-224ENST00000556737 CSF1P09603 554 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 BRS3P32247 399 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 MNDAP41218 407 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 VDAC2P45880 294 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-224ENST00000556737 ARHGDIBP52566 201 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 PITPNAQ00169 270 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 UNC119Q13432 240 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 NKAPLQ5M9Q1 402 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 CCDC144NLQ6NUI1 221 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 MFSD4AQ8N468 514 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 C8orf31Q8N9H6 132 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 ZNF439Q8NDP4 499 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 OR56B1Q8NGI3 324 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 OR52M1Q8NGK5 317 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 OR4K15Q8NH41 348 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 OR56B4Q8NH76 319 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 FAM110DQ8TAY7 271 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-224ENST00000556737 CCDC107Q8WV48 283 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 ARL11Q969Q4 196 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 RPEQ96AT9 228 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 NICN1Q9BSH3 213 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 ABCG5Q9H222 651 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 GFOD1Q9NXC2 390 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 ETAA1Q9NY74 926 aa8.23□□□□□ -1.09
SHMT2-224ENST00000556737 IGHV3-43A0A0B4J1X8 118 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 MCRIP1C9JLW8 97 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 HSD17B6O14756 317 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 SLC31A2O15432 143 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 PDCD6O75340 191 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 SCGNO76038 276 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 IGHV3-43DP0DP04 118 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 GZMHP20718 246 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 TAS2R20P59543 309 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 RPS27AP62979 156 aaKnown RBP8.22□□□□□ -1.09
SHMT2-224ENST00000556737 QRFPP83859 136 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 ZNF816Q0VGE8 651 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-224ENST00000556737 TRIQKQ629K1 86 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 PYHIN1Q6K0P9 492 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 Q6ZPA2 131 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 OR8H3Q8N146 312 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 LYG1Q8N1E2 194 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 LINC00311Q8N616 119 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 DRAM1Q8N682 238 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 MRPL30Q8TCC3 161 aaKnown RBP8.22□□□□□ -1.09
SHMT2-224ENST00000556737 BORCS5Q969J3 196 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 ST6GALNAC6Q969X2 333 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 PTX4Q96A99 478 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 MBNL3Q9NUK0 354 aaKnown RBP8.22□□□□□ -1.09
SHMT2-224ENST00000556737 V9GYH0 126 aa8.22□□□□□ -1.09
SHMT2-224ENST00000556737 A0A0A6YYD4 124 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 UBE2QL1A1L167 161 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 LDLRAD4O15165 306 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 XRCC3O43542 346 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 CA11O75493 328 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 HBZP02008 142 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 GLAP06280 429 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 RCC1P18754 421 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-224ENST00000556737 FUT3P21217 361 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 CHATP28329 748 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 CD40LGP29965 261 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 BLVRBP30043 206 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-224ENST00000556737 ETV6P41212 452 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 RAB7AP51149 207 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF137PP52743 207 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 PPP5CP53041 499 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 DEFA6Q01524 100 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 DCTN2Q13561 401 aaKnown RBP8.21□□□□□ -1.1
SHMT2-224ENST00000556737 TMEM30BQ3MIR4 351 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 MOGAT2Q3SYC2 334 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 Q3ZCU0 254 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 ABCA11PQ4W5N1 156 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 TCTEX1D4Q5JR98 221 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 SLC25A48Q6ZT89 311 aaKnown RBP8.21□□□□□ -1.1
SHMT2-224ENST00000556737 C5orf24Q7Z6I8 188 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 NDUFA11Q86Y39 141 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms