RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FAM74A1Q5RGS3 127 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 LINC01560Q8TB33 94 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 SCARB1Q8WTV0 552 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 NDRG3Q9UGV2 375 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 IL19Q9UHD0 177 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 LINC00587B1AMM8 73 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 ZNF737O75373 536 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 LHBP01229 141 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 LYL1P12980 280 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 ZNF16P17020 682 aaPredicted RBP15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 ARL11Q969Q4 196 aa15.31■□□□□ 0.04
SDR39U1-220ENST00000556548 A0A1B0GW55 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DEFB108AA8MXU0 73 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 SNAPINO95295 136 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 H2AFB1P0C5Y9 115 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L2P0CJ85 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L3P0CJ86 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L4P0CJ87 422 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L5P0CJ88 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L6P0CJ89 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L7P0CJ90 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 TNFSF4P23510 183 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 PPP1CCP36873 323 aaKnown RBP15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 CFHR2P36980 270 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 UBA52P62987 128 aaKnown RBP15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4L9Q6RFH8 374 aaPredicted RBP15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 ST6GALNAC3Q8NDV1 305 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 PLPPR2Q96GM1 343 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 DUX4Q9UBX2 424 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 ZDHHC8Q9ULC8 765 aa15.3■□□□□ 0.04
SDR39U1-220ENST00000556548 TRAV20A0A0B4J274 112 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 TEX46H3BTG2 121 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 DEDDO75618 318 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 NXPH3O95157 252 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 F2RP25116 425 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 S100GP29377 79 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 SMCO1Q147U7 214 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 CLEC9AQ6UXN8 241 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 TMEM56Q96MV1 263 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 RNF7Q9UBF6 113 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 TMED3Q9Y3Q3 217 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 TMEM56-RWDD3S4R434 201 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 COL6A6A6NMZ7 2263 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 FAM74A7A6NL05 159 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 K7EPK0 472 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 CDS2O95674 445 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 EDDM3BP56851 147 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 CDSNQ15517 529 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 FAM74A3Q4VXF1 159 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 FAM71E2Q8N5Q1 922 aa15.29■□□□□ 0.04
SDR39U1-220ENST00000556548 ADAM20O43506 726 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 UCP1P25874 307 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 GATA4P43694 442 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 ASCL1P50553 236 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 SRPXP78539 464 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 ZNF808Q8N4W9 903 aaPredicted RBP15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 OR2S2Q9NQN1 319 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 BIN3Q9NQY0 253 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 H0Y980 276 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 HKR1P10072 659 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 RAB13P51153 203 aa15.28■□□□□ 0.04
SDR39U1-220ENST00000556548 FAM90A1Q86YD7 464 aa15.27■□□□□ 0.04
SDR39U1-220ENST00000556548 DRAM1Q8N682 238 aa15.27■□□□□ 0.04
SDR39U1-220ENST00000556548 NINJ1Q92982 152 aa15.27■□□□□ 0.04
SDR39U1-220ENST00000556548 LRRC46Q96FV0 321 aa15.27■□□□□ 0.04
SDR39U1-220ENST00000556548 AQP10Q96PS8 301 aa15.27■□□□□ 0.04
SDR39U1-220ENST00000556548 OR2D2Q9H210 308 aa15.27■□□□□ 0.04
SDR39U1-220ENST00000556548 PKDREJQ9NTG1 2253 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 C17orf100A8MU93 164 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 SHISA9B4DS77 424 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 IGHV3-7P01780 117 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 GYPAP02724 150 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 SERPINE2P07093 398 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 RPL12P30050 165 aaKnown RBP15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 TLE1Q04724 770 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 IZUMO4Q1ZYL8 232 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 KDF1Q8NAX2 398 aaPredicted RBP15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 SNX22Q96L94 193 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 NGBQ9NPG2 151 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 CYTL1Q9NRR1 136 aa15.27■□□□□ 0.03
SDR39U1-220ENST00000556548 ODAMA1E959 279 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 E7EQL1 145 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 EPHA1P21709 976 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 OMGP23515 440 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 DMRTC2Q8IXT2 367 aaPredicted RBP15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 OR5D13Q8NGL4 314 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 CCL13Q99616 98 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 SMIM3Q9BZL3 60 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 TPRP12270 2363 aaKnown RBP15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 K7N7A8 449 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 MGST3O14880 152 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 PLAUP00749 431 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 FABP1P07148 127 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 CHRNB4P30926 498 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 ADORA2A-AS1P86434 159 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 NCMAPQ5T1S8 102 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 OR4D5Q8NGN0 318 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 LURAP1Q96LR2 239 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 MAGT1Q9H0U3 335 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms